Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC71Q8IV32 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC71Q8IV32 AC010141.3-201ENST00000456659 717 ntBASIC19.39■□□□□ 0.69
CCDC71Q8IV32 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC71Q8IV32 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
CCDC71Q8IV32 AC087239.1-201ENST00000622671 572 ntBASIC19.39■□□□□ 0.69
CCDC71Q8IV32 AC068587.7-201ENST00000641602 218 ntBASIC19.39■□□□□ 0.69
CCDC71Q8IV32 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CCDC71Q8IV32 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC71Q8IV32 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC71Q8IV32 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CCDC71Q8IV32 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CCDC71Q8IV32 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
CCDC71Q8IV32 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC71Q8IV32 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC71Q8IV32 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC71Q8IV32 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC71Q8IV32 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC71Q8IV32 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC71Q8IV32 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC71Q8IV32 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC71Q8IV32 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC71Q8IV32 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC71Q8IV32 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC71Q8IV32 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC71Q8IV32 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.38■□□□□ 0.69
CCDC71Q8IV32 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC71Q8IV32 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC71Q8IV32 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC71Q8IV32 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC71Q8IV32 SMUG1P1-201ENST00000590640 811 ntBASIC19.38■□□□□ 0.69
CCDC71Q8IV32 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.38■□□□□ 0.69
CCDC71Q8IV32 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC71Q8IV32 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC71Q8IV32 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC71Q8IV32 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC71Q8IV32 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
CCDC71Q8IV32 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC71Q8IV32 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC71Q8IV32 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC71Q8IV32 OR7E47P-201ENST00000546390 1422 ntBASIC19.37■□□□□ 0.69
CCDC71Q8IV32 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC71Q8IV32 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CCDC71Q8IV32 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC71Q8IV32 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC71Q8IV32 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC71Q8IV32 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.37■□□□□ 0.69
CCDC71Q8IV32 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC71Q8IV32 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC71Q8IV32 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
CCDC71Q8IV32 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC71Q8IV32 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC71Q8IV32 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CCDC71Q8IV32 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC71Q8IV32 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC71Q8IV32 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC71Q8IV32 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC71Q8IV32 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC71Q8IV32 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CCDC71Q8IV32 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC71Q8IV32 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC71Q8IV32 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC71Q8IV32 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC71Q8IV32 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC71Q8IV32 CDCA4P2-201ENST00000441182 718 ntBASIC19.36■□□□□ 0.69
CCDC71Q8IV32 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC71Q8IV32 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC71Q8IV32 AC073111.5-205ENST00000641717 521 ntBASIC19.36■□□□□ 0.69
CCDC71Q8IV32 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC71Q8IV32 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
CCDC71Q8IV32 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CCDC71Q8IV32 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC71Q8IV32 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC71Q8IV32 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC71Q8IV32 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC71Q8IV32 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC71Q8IV32 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC71Q8IV32 AP005212.1-201ENST00000581547 1997 ntBASIC19.35■□□□□ 0.69
CCDC71Q8IV32 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC71Q8IV32 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC71Q8IV32 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC71Q8IV32 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CCDC71Q8IV32 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC71Q8IV32 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.35■□□□□ 0.69
CCDC71Q8IV32 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC71Q8IV32 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC71Q8IV32 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.35■□□□□ 0.69
CCDC71Q8IV32 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC71Q8IV32 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC71Q8IV32 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC71Q8IV32 AC073314.1-201ENST00000568729 2216 ntBASIC19.35■□□□□ 0.69
CCDC71Q8IV32 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC71Q8IV32 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC71Q8IV32 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC71Q8IV32 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CCDC71Q8IV32 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC71Q8IV32 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC71Q8IV32 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC71Q8IV32 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC71Q8IV32 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms