Protein–RNA interactions for Protein: Q86YQ8

CPNE8, Copine-8, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8Q86YQ8 TERF1P2-201ENST00000583350 1212 ntBASIC21.73■■□□□ 1.07
CPNE8Q86YQ8 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
CPNE8Q86YQ8 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.73■■□□□ 1.07
CPNE8Q86YQ8 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.73■■□□□ 1.07
CPNE8Q86YQ8 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CPNE8Q86YQ8 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPNE8Q86YQ8 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.73■■□□□ 1.07
CPNE8Q86YQ8 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.73■■□□□ 1.07
CPNE8Q86YQ8 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.73■■□□□ 1.07
CPNE8Q86YQ8 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CPNE8Q86YQ8 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPNE8Q86YQ8 FP700111.2-201ENST00000619190 1892 ntBASIC21.73■■□□□ 1.07
CPNE8Q86YQ8 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CPNE8Q86YQ8 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE8Q86YQ8 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.72■■□□□ 1.07
CPNE8Q86YQ8 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE8Q86YQ8 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CPNE8Q86YQ8 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.72■■□□□ 1.07
CPNE8Q86YQ8 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE8Q86YQ8 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE8Q86YQ8 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.72■■□□□ 1.07
CPNE8Q86YQ8 AC138907.5-202ENST00000569484 235 ntBASIC21.72■■□□□ 1.07
CPNE8Q86YQ8 CCDC92B-201ENST00000575506 885 ntBASIC21.72■■□□□ 1.07
CPNE8Q86YQ8 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE8Q86YQ8 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE8Q86YQ8 GABARAPL3-202ENST00000624044 1851 ntBASIC21.72■■□□□ 1.07
CPNE8Q86YQ8 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE8Q86YQ8 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE8Q86YQ8 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.72■■□□□ 1.07
CPNE8Q86YQ8 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE8Q86YQ8 LINC02228-203ENST00000641970 1355 ntBASIC21.72■■□□□ 1.07
CPNE8Q86YQ8 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE8Q86YQ8 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE8Q86YQ8 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE8Q86YQ8 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CPNE8Q86YQ8 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CPNE8Q86YQ8 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CPNE8Q86YQ8 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CPNE8Q86YQ8 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.71■■□□□ 1.07
CPNE8Q86YQ8 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CPNE8Q86YQ8 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CPNE8Q86YQ8 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.71■■□□□ 1.07
CPNE8Q86YQ8 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.71■■□□□ 1.07
CPNE8Q86YQ8 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CPNE8Q86YQ8 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CPNE8Q86YQ8 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CPNE8Q86YQ8 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CPNE8Q86YQ8 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CPNE8Q86YQ8 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
CPNE8Q86YQ8 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
CPNE8Q86YQ8 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
CPNE8Q86YQ8 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.7■■□□□ 1.06
CPNE8Q86YQ8 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CPNE8Q86YQ8 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.7■■□□□ 1.06
CPNE8Q86YQ8 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPNE8Q86YQ8 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.7■■□□□ 1.06
CPNE8Q86YQ8 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.7■■□□□ 1.06
CPNE8Q86YQ8 AC010141.2-201ENST00000452426 721 ntBASIC21.7■■□□□ 1.06
CPNE8Q86YQ8 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPNE8Q86YQ8 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.7■■□□□ 1.06
CPNE8Q86YQ8 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.7■■□□□ 1.06
CPNE8Q86YQ8 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CPNE8Q86YQ8 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPNE8Q86YQ8 AC004854.2-201ENST00000608450 1441 ntBASIC21.7■■□□□ 1.06
CPNE8Q86YQ8 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPNE8Q86YQ8 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPNE8Q86YQ8 AL121603.2-201ENST00000557373 2117 ntBASIC21.7■■□□□ 1.06
CPNE8Q86YQ8 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CPNE8Q86YQ8 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.69■■□□□ 1.06
CPNE8Q86YQ8 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CPNE8Q86YQ8 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
CPNE8Q86YQ8 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.69■■□□□ 1.06
CPNE8Q86YQ8 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.69■■□□□ 1.06
CPNE8Q86YQ8 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CPNE8Q86YQ8 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CPNE8Q86YQ8 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CPNE8Q86YQ8 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CPNE8Q86YQ8 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.69■■□□□ 1.06
CPNE8Q86YQ8 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CPNE8Q86YQ8 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.69■■□□□ 1.06
CPNE8Q86YQ8 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CPNE8Q86YQ8 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CPNE8Q86YQ8 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.69■■□□□ 1.06
CPNE8Q86YQ8 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CPNE8Q86YQ8 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.69■■□□□ 1.06
CPNE8Q86YQ8 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
CPNE8Q86YQ8 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CPNE8Q86YQ8 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.69■■□□□ 1.06
CPNE8Q86YQ8 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPNE8Q86YQ8 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.68■■□□□ 1.06
CPNE8Q86YQ8 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.68■■□□□ 1.06
CPNE8Q86YQ8 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPNE8Q86YQ8 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.68■■□□□ 1.06
CPNE8Q86YQ8 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.68■■□□□ 1.06
CPNE8Q86YQ8 YBX1P1-201ENST00000445822 960 ntBASIC21.68■■□□□ 1.06
CPNE8Q86YQ8 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPNE8Q86YQ8 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.68■■□□□ 1.06
CPNE8Q86YQ8 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.68■■□□□ 1.06
CPNE8Q86YQ8 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.68■■□□□ 1.06
CPNE8Q86YQ8 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms