Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 CNN2P6-201ENST00000439038 900 ntBASIC18.25■□□□□ 0.51
RTTNQ86VV8 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.25■□□□□ 0.51
RTTNQ86VV8 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RTTNQ86VV8 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RTTNQ86VV8 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RTTNQ86VV8 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RTTNQ86VV8 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTTNQ86VV8 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RTTNQ86VV8 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RTTNQ86VV8 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RTTNQ86VV8 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RTTNQ86VV8 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTTNQ86VV8 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RTTNQ86VV8 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTTNQ86VV8 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTTNQ86VV8 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTTNQ86VV8 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.24■□□□□ 0.51
RTTNQ86VV8 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RTTNQ86VV8 AC061975.6-201ENST00000579045 1553 ntBASIC18.24■□□□□ 0.51
RTTNQ86VV8 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RTTNQ86VV8 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.24■□□□□ 0.51
RTTNQ86VV8 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTTNQ86VV8 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTTNQ86VV8 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTTNQ86VV8 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
RTTNQ86VV8 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTTNQ86VV8 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.23■□□□□ 0.51
RTTNQ86VV8 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.23■□□□□ 0.51
RTTNQ86VV8 AC073111.5-205ENST00000641717 521 ntBASIC18.23■□□□□ 0.51
RTTNQ86VV8 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTTNQ86VV8 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.23■□□□□ 0.51
RTTNQ86VV8 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RTTNQ86VV8 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTTNQ86VV8 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTTNQ86VV8 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTTNQ86VV8 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
RTTNQ86VV8 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTTNQ86VV8 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RTTNQ86VV8 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.23■□□□□ 0.51
RTTNQ86VV8 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.23■□□□□ 0.51
RTTNQ86VV8 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RTTNQ86VV8 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.23■□□□□ 0.51
RTTNQ86VV8 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RTTNQ86VV8 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.23■□□□□ 0.51
RTTNQ86VV8 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTTNQ86VV8 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
RTTNQ86VV8 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTTNQ86VV8 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RTTNQ86VV8 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.22■□□□□ 0.51
RTTNQ86VV8 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
RTTNQ86VV8 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
RTTNQ86VV8 AC006015.1-201ENST00000429970 570 ntBASIC18.22■□□□□ 0.51
RTTNQ86VV8 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.22■□□□□ 0.51
RTTNQ86VV8 MIR4651-201ENST00000582622 73 ntBASIC18.22■□□□□ 0.51
RTTNQ86VV8 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RTTNQ86VV8 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTTNQ86VV8 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTTNQ86VV8 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTTNQ86VV8 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.22■□□□□ 0.51
RTTNQ86VV8 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
RTTNQ86VV8 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTTNQ86VV8 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.22■□□□□ 0.51
RTTNQ86VV8 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTTNQ86VV8 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.22■□□□□ 0.51
RTTNQ86VV8 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.22■□□□□ 0.51
RTTNQ86VV8 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
RTTNQ86VV8 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTTNQ86VV8 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTTNQ86VV8 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTTNQ86VV8 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
RTTNQ86VV8 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RTTNQ86VV8 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.21■□□□□ 0.51
RTTNQ86VV8 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RTTNQ86VV8 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.21■□□□□ 0.51
RTTNQ86VV8 AC079140.4-201ENST00000507448 529 ntBASIC18.21■□□□□ 0.51
RTTNQ86VV8 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.21■□□□□ 0.51
RTTNQ86VV8 AC142086.2-201ENST00000569753 217 ntBASIC18.21■□□□□ 0.51
RTTNQ86VV8 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.21■□□□□ 0.51
RTTNQ86VV8 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.21■□□□□ 0.51
RTTNQ86VV8 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTTNQ86VV8 AL391422.3-201ENST00000603791 2761 ntBASIC18.21■□□□□ 0.51
RTTNQ86VV8 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RTTNQ86VV8 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.21■□□□□ 0.51
RTTNQ86VV8 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTTNQ86VV8 KRT16P2-201ENST00000414673 1423 ntBASIC18.21■□□□□ 0.51
RTTNQ86VV8 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTTNQ86VV8 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
RTTNQ86VV8 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.5
RTTNQ86VV8 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
RTTNQ86VV8 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
RTTNQ86VV8 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
RTTNQ86VV8 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
RTTNQ86VV8 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.5
RTTNQ86VV8 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.21■□□□□ 0.5
RTTNQ86VV8 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.21■□□□□ 0.5
RTTNQ86VV8 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTTNQ86VV8 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.2■□□□□ 0.5
RTTNQ86VV8 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTTNQ86VV8 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.2■□□□□ 0.5
RTTNQ86VV8 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms