Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL55Q7Z7F7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL55Q7Z7F7 MIR939-201ENST00000401314 82 ntBASIC13.29□□□□□ -0.28
MRPL55Q7Z7F7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC13.29□□□□□ -0.28
MRPL55Q7Z7F7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC13.29□□□□□ -0.28
MRPL55Q7Z7F7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC13.29□□□□□ -0.28
MRPL55Q7Z7F7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC13.29□□□□□ -0.28
MRPL55Q7Z7F7 RALB-208ENST00000631312 311 ntTSL 5 BASIC13.29□□□□□ -0.28
MRPL55Q7Z7F7 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL55Q7Z7F7 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL55Q7Z7F7 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL55Q7Z7F7 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL55Q7Z7F7 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL55Q7Z7F7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC13.29□□□□□ -0.28
MRPL55Q7Z7F7 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC13.29□□□□□ -0.28
MRPL55Q7Z7F7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL55Q7Z7F7 MED17-221ENST00000639724 2317 ntTSL 5 BASIC13.29□□□□□ -0.28
MRPL55Q7Z7F7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC13.29□□□□□ -0.28
MRPL55Q7Z7F7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL55Q7Z7F7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL55Q7Z7F7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
MRPL55Q7Z7F7 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MRPL55Q7Z7F7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
MRPL55Q7Z7F7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC13.28□□□□□ -0.28
MRPL55Q7Z7F7 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
MRPL55Q7Z7F7 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
MRPL55Q7Z7F7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MRPL55Q7Z7F7 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MRPL55Q7Z7F7 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MRPL55Q7Z7F7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MRPL55Q7Z7F7 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
MRPL55Q7Z7F7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MRPL55Q7Z7F7 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC13.28□□□□□ -0.28
MRPL55Q7Z7F7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC13.28□□□□□ -0.28
MRPL55Q7Z7F7 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC13.28□□□□□ -0.28
MRPL55Q7Z7F7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC13.28□□□□□ -0.28
MRPL55Q7Z7F7 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC13.28□□□□□ -0.28
MRPL55Q7Z7F7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC13.28□□□□□ -0.28
MRPL55Q7Z7F7 AC110285.6-201ENST00000617652 491 ntBASIC13.28□□□□□ -0.28
MRPL55Q7Z7F7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
MRPL55Q7Z7F7 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
MRPL55Q7Z7F7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
MRPL55Q7Z7F7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC13.28□□□□□ -0.28
MRPL55Q7Z7F7 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
MRPL55Q7Z7F7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
MRPL55Q7Z7F7 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
MRPL55Q7Z7F7 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
MRPL55Q7Z7F7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC13.28□□□□□ -0.28
MRPL55Q7Z7F7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
MRPL55Q7Z7F7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
MRPL55Q7Z7F7 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
MRPL55Q7Z7F7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MRPL55Q7Z7F7 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
MRPL55Q7Z7F7 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
MRPL55Q7Z7F7 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
MRPL55Q7Z7F7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC13.27□□□□□ -0.28
MRPL55Q7Z7F7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
MRPL55Q7Z7F7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
MRPL55Q7Z7F7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
MRPL55Q7Z7F7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
MRPL55Q7Z7F7 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
MRPL55Q7Z7F7 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
MRPL55Q7Z7F7 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC13.27□□□□□ -0.29
MRPL55Q7Z7F7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
MRPL55Q7Z7F7 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
MRPL55Q7Z7F7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
MRPL55Q7Z7F7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
MRPL55Q7Z7F7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
MRPL55Q7Z7F7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC13.27□□□□□ -0.29
MRPL55Q7Z7F7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC13.27□□□□□ -0.29
MRPL55Q7Z7F7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC13.27□□□□□ -0.29
MRPL55Q7Z7F7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC13.27□□□□□ -0.29
MRPL55Q7Z7F7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC13.27□□□□□ -0.29
MRPL55Q7Z7F7 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
MRPL55Q7Z7F7 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
MRPL55Q7Z7F7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
MRPL55Q7Z7F7 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
MRPL55Q7Z7F7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
MRPL55Q7Z7F7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
MRPL55Q7Z7F7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
MRPL55Q7Z7F7 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
MRPL55Q7Z7F7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC13.27□□□□□ -0.29
MRPL55Q7Z7F7 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
MRPL55Q7Z7F7 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
MRPL55Q7Z7F7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC13.27□□□□□ -0.29
MRPL55Q7Z7F7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
MRPL55Q7Z7F7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC13.27□□□□□ -0.29
MRPL55Q7Z7F7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
MRPL55Q7Z7F7 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC13.27□□□□□ -0.29
MRPL55Q7Z7F7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC13.27□□□□□ -0.29
MRPL55Q7Z7F7 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
MRPL55Q7Z7F7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
MRPL55Q7Z7F7 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
MRPL55Q7Z7F7 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC13.27□□□□□ -0.29
MRPL55Q7Z7F7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC13.26□□□□□ -0.29
MRPL55Q7Z7F7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
MRPL55Q7Z7F7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
MRPL55Q7Z7F7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MRPL55Q7Z7F7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC13.26□□□□□ -0.29
MRPL55Q7Z7F7 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms