Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SHFQ7M4L6 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SHFQ7M4L6 AC121338.2-201ENST00000622535 1744 ntBASIC18.69■□□□□ 0.58
SHFQ7M4L6 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SHFQ7M4L6 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHFQ7M4L6 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.69■□□□□ 0.58
SHFQ7M4L6 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHFQ7M4L6 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.69■□□□□ 0.58
SHFQ7M4L6 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.69■□□□□ 0.58
SHFQ7M4L6 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SHFQ7M4L6 AC133561.4-201ENST00000566112 224 ntBASIC18.69■□□□□ 0.58
SHFQ7M4L6 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.69■□□□□ 0.58
SHFQ7M4L6 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SHFQ7M4L6 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SHFQ7M4L6 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SHFQ7M4L6 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
SHFQ7M4L6 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.69■□□□□ 0.58
SHFQ7M4L6 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHFQ7M4L6 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.69■□□□□ 0.58
SHFQ7M4L6 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SHFQ7M4L6 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHFQ7M4L6 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHFQ7M4L6 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.68■□□□□ 0.58
SHFQ7M4L6 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHFQ7M4L6 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHFQ7M4L6 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHFQ7M4L6 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHFQ7M4L6 AC126544.1-201ENST00000580842 1059 ntBASIC18.68■□□□□ 0.58
SHFQ7M4L6 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SHFQ7M4L6 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHFQ7M4L6 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SHFQ7M4L6 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SHFQ7M4L6 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
SHFQ7M4L6 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.68■□□□□ 0.58
SHFQ7M4L6 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHFQ7M4L6 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHFQ7M4L6 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.68■□□□□ 0.58
SHFQ7M4L6 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SHFQ7M4L6 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHFQ7M4L6 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHFQ7M4L6 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SHFQ7M4L6 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHFQ7M4L6 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHFQ7M4L6 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.67■□□□□ 0.58
SHFQ7M4L6 AL136162.1-201ENST00000607711 1078 ntBASIC18.67■□□□□ 0.58
SHFQ7M4L6 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHFQ7M4L6 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHFQ7M4L6 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SHFQ7M4L6 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHFQ7M4L6 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHFQ7M4L6 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHFQ7M4L6 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHFQ7M4L6 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.66■□□□□ 0.58
SHFQ7M4L6 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.66■□□□□ 0.58
SHFQ7M4L6 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHFQ7M4L6 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHFQ7M4L6 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.66■□□□□ 0.58
SHFQ7M4L6 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.66■□□□□ 0.58
SHFQ7M4L6 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.66■□□□□ 0.58
SHFQ7M4L6 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHFQ7M4L6 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SHFQ7M4L6 IGHV3-19-201ENST00000521488 291 ntBASIC18.66■□□□□ 0.58
SHFQ7M4L6 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.66■□□□□ 0.58
SHFQ7M4L6 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.66■□□□□ 0.58
SHFQ7M4L6 AC024257.2-201ENST00000549699 147 ntBASIC18.66■□□□□ 0.58
SHFQ7M4L6 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.66■□□□□ 0.58
SHFQ7M4L6 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHFQ7M4L6 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHFQ7M4L6 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SHFQ7M4L6 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHFQ7M4L6 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
SHFQ7M4L6 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHFQ7M4L6 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.66■□□□□ 0.58
SHFQ7M4L6 AC009237.3-201ENST00000393279 1427 ntBASIC18.66■□□□□ 0.58
SHFQ7M4L6 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
SHFQ7M4L6 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHFQ7M4L6 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SHFQ7M4L6 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHFQ7M4L6 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SHFQ7M4L6 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHFQ7M4L6 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHFQ7M4L6 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SHFQ7M4L6 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHFQ7M4L6 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SHFQ7M4L6 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SHFQ7M4L6 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SHFQ7M4L6 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SHFQ7M4L6 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.65■□□□□ 0.58
SHFQ7M4L6 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.65■□□□□ 0.58
SHFQ7M4L6 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHFQ7M4L6 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SHFQ7M4L6 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHFQ7M4L6 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.65■□□□□ 0.58
SHFQ7M4L6 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SHFQ7M4L6 AC135279.3-201ENST00000610945 1311 ntBASIC18.65■□□□□ 0.58
SHFQ7M4L6 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SHFQ7M4L6 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHFQ7M4L6 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHFQ7M4L6 AC007225.1-201ENST00000566331 1836 ntBASIC18.65■□□□□ 0.58
SHFQ7M4L6 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms