Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LCA10Q71F78 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC11.13□□□□□ -0.63
LCA10Q71F78 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC11.13□□□□□ -0.63
LCA10Q71F78 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC11.13□□□□□ -0.63
LCA10Q71F78 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC11.13□□□□□ -0.63
LCA10Q71F78 PCDHAC2-203ENST00000615316 3011 ntBASIC11.13□□□□□ -0.63
LCA10Q71F78 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC11.13□□□□□ -0.63
LCA10Q71F78 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LCA10Q71F78 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
LCA10Q71F78 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LCA10Q71F78 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LCA10Q71F78 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC11.13□□□□□ -0.63
LCA10Q71F78 RARRES2P2-201ENST00000394842 485 ntBASIC11.13□□□□□ -0.63
LCA10Q71F78 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LCA10Q71F78 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC11.13□□□□□ -0.63
LCA10Q71F78 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LCA10Q71F78 U85056.1-201ENST00000616429 682 ntBASIC11.13□□□□□ -0.63
LCA10Q71F78 AC129492.7-201ENST00000622992 756 ntBASIC11.13□□□□□ -0.63
LCA10Q71F78 GAK-223ENST00000628912 497 ntTSL 5 BASIC11.13□□□□□ -0.63
LCA10Q71F78 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LCA10Q71F78 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LCA10Q71F78 AP000974.1-201ENST00000623909 2387 ntBASIC11.13□□□□□ -0.63
LCA10Q71F78 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
LCA10Q71F78 ADK-206ENST00000541550 2222 ntTSL 2 BASIC11.13□□□□□ -0.63
LCA10Q71F78 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
LCA10Q71F78 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LCA10Q71F78 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LCA10Q71F78 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
LCA10Q71F78 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC11.13□□□□□ -0.63
LCA10Q71F78 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LCA10Q71F78 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC11.13□□□□□ -0.63
LCA10Q71F78 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LCA10Q71F78 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LCA10Q71F78 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC11.13□□□□□ -0.63
LCA10Q71F78 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC11.12□□□□□ -0.63
LCA10Q71F78 AP000997.3-201ENST00000623333 2250 ntBASIC11.12□□□□□ -0.63
LCA10Q71F78 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LCA10Q71F78 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC11.12□□□□□ -0.63
LCA10Q71F78 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LCA10Q71F78 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LCA10Q71F78 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
LCA10Q71F78 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
LCA10Q71F78 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LCA10Q71F78 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC11.12□□□□□ -0.63
LCA10Q71F78 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
LCA10Q71F78 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC11.12□□□□□ -0.63
LCA10Q71F78 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LCA10Q71F78 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LCA10Q71F78 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC11.12□□□□□ -0.63
LCA10Q71F78 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC11.12□□□□□ -0.63
LCA10Q71F78 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LCA10Q71F78 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LCA10Q71F78 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LCA10Q71F78 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LCA10Q71F78 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC11.12□□□□□ -0.63
LCA10Q71F78 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
LCA10Q71F78 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LCA10Q71F78 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LCA10Q71F78 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC11.12□□□□□ -0.63
LCA10Q71F78 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
LCA10Q71F78 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LCA10Q71F78 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC11.12□□□□□ -0.63
LCA10Q71F78 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LCA10Q71F78 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
LCA10Q71F78 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC11.12□□□□□ -0.63
LCA10Q71F78 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
LCA10Q71F78 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LCA10Q71F78 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC11.12□□□□□ -0.63
LCA10Q71F78 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
LCA10Q71F78 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
LCA10Q71F78 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LCA10Q71F78 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LCA10Q71F78 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LCA10Q71F78 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LCA10Q71F78 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LCA10Q71F78 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
LCA10Q71F78 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC11.11□□□□□ -0.63
LCA10Q71F78 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
LCA10Q71F78 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LCA10Q71F78 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
LCA10Q71F78 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LCA10Q71F78 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LCA10Q71F78 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC11.11□□□□□ -0.63
LCA10Q71F78 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
LCA10Q71F78 AC139795.1-202ENST00000500444 432 ntBASIC11.11□□□□□ -0.63
LCA10Q71F78 AC022616.5-201ENST00000518796 181 ntBASIC11.11□□□□□ -0.63
LCA10Q71F78 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC11.11□□□□□ -0.63
LCA10Q71F78 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LCA10Q71F78 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LCA10Q71F78 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
LCA10Q71F78 AC012313.1-201ENST00000593393 3059 ntBASIC11.11□□□□□ -0.63
LCA10Q71F78 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC11.11□□□□□ -0.63
LCA10Q71F78 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LCA10Q71F78 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LCA10Q71F78 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC11.11□□□□□ -0.63
LCA10Q71F78 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
LCA10Q71F78 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LCA10Q71F78 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LCA10Q71F78 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LCA10Q71F78 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms