Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
PTCHD4Q6ZW05 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
PTCHD4Q6ZW05 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PTCHD4Q6ZW05 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTCHD4Q6ZW05 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PTCHD4Q6ZW05 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
PTCHD4Q6ZW05 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTCHD4Q6ZW05 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTCHD4Q6ZW05 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTCHD4Q6ZW05 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
PTCHD4Q6ZW05 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
PTCHD4Q6ZW05 AC133561.4-201ENST00000566112 224 ntBASIC19.02■□□□□ 0.64
PTCHD4Q6ZW05 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTCHD4Q6ZW05 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.02■□□□□ 0.64
PTCHD4Q6ZW05 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PTCHD4Q6ZW05 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.02■□□□□ 0.64
PTCHD4Q6ZW05 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PTCHD4Q6ZW05 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTCHD4Q6ZW05 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
PTCHD4Q6ZW05 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PTCHD4Q6ZW05 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PTCHD4Q6ZW05 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.01■□□□□ 0.63
PTCHD4Q6ZW05 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.01■□□□□ 0.63
PTCHD4Q6ZW05 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
PTCHD4Q6ZW05 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PTCHD4Q6ZW05 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PTCHD4Q6ZW05 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PTCHD4Q6ZW05 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.01■□□□□ 0.63
PTCHD4Q6ZW05 AL136162.1-201ENST00000607711 1078 ntBASIC19.01■□□□□ 0.63
PTCHD4Q6ZW05 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTCHD4Q6ZW05 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
PTCHD4Q6ZW05 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTCHD4Q6ZW05 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
PTCHD4Q6ZW05 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19■□□□□ 0.63
PTCHD4Q6ZW05 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19■□□□□ 0.63
PTCHD4Q6ZW05 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PTCHD4Q6ZW05 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PTCHD4Q6ZW05 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
PTCHD4Q6ZW05 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19■□□□□ 0.63
PTCHD4Q6ZW05 AFG3L1P-217ENST00000557444 2447 ntBASIC19■□□□□ 0.63
PTCHD4Q6ZW05 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
PTCHD4Q6ZW05 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19■□□□□ 0.63
PTCHD4Q6ZW05 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PTCHD4Q6ZW05 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19■□□□□ 0.63
PTCHD4Q6ZW05 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PTCHD4Q6ZW05 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19■□□□□ 0.63
PTCHD4Q6ZW05 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19■□□□□ 0.63
PTCHD4Q6ZW05 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19■□□□□ 0.63
PTCHD4Q6ZW05 SMUG1P1-201ENST00000590640 811 ntBASIC19■□□□□ 0.63
PTCHD4Q6ZW05 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19■□□□□ 0.63
PTCHD4Q6ZW05 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PTCHD4Q6ZW05 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PTCHD4Q6ZW05 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19■□□□□ 0.63
PTCHD4Q6ZW05 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PTCHD4Q6ZW05 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PTCHD4Q6ZW05 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
PTCHD4Q6ZW05 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19■□□□□ 0.63
PTCHD4Q6ZW05 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19■□□□□ 0.63
PTCHD4Q6ZW05 AP006587.3-201ENST00000525742 1516 ntBASIC19■□□□□ 0.63
PTCHD4Q6ZW05 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.99■□□□□ 0.63
PTCHD4Q6ZW05 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTCHD4Q6ZW05 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PTCHD4Q6ZW05 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTCHD4Q6ZW05 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.99■□□□□ 0.63
PTCHD4Q6ZW05 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTCHD4Q6ZW05 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTCHD4Q6ZW05 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
PTCHD4Q6ZW05 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTCHD4Q6ZW05 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTCHD4Q6ZW05 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PTCHD4Q6ZW05 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PTCHD4Q6ZW05 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PTCHD4Q6ZW05 AC233992.3-201ENST00000607491 485 ntBASIC18.99■□□□□ 0.63
PTCHD4Q6ZW05 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.99■□□□□ 0.63
PTCHD4Q6ZW05 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTCHD4Q6ZW05 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
PTCHD4Q6ZW05 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTCHD4Q6ZW05 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTCHD4Q6ZW05 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTCHD4Q6ZW05 AC121338.2-201ENST00000622535 1744 ntBASIC18.99■□□□□ 0.63
PTCHD4Q6ZW05 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PTCHD4Q6ZW05 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
PTCHD4Q6ZW05 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTCHD4Q6ZW05 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.99■□□□□ 0.63
PTCHD4Q6ZW05 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PTCHD4Q6ZW05 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.98■□□□□ 0.63
PTCHD4Q6ZW05 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
PTCHD4Q6ZW05 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
PTCHD4Q6ZW05 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTCHD4Q6ZW05 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.98■□□□□ 0.63
PTCHD4Q6ZW05 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PTCHD4Q6ZW05 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.98■□□□□ 0.63
PTCHD4Q6ZW05 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
PTCHD4Q6ZW05 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTCHD4Q6ZW05 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PTCHD4Q6ZW05 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PTCHD4Q6ZW05 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTCHD4Q6ZW05 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
PTCHD4Q6ZW05 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTCHD4Q6ZW05 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms