Protein–RNA interactions for Protein: Q6ZST4

LCNL1, Lipocalin-like 1 protein, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCNL1Q6ZST4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCNL1Q6ZST4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
LCNL1Q6ZST4 KRT16P2-201ENST00000414673 1423 ntBASIC16.31■□□□□ 0.2
LCNL1Q6ZST4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCNL1Q6ZST4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.31■□□□□ 0.2
LCNL1Q6ZST4 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.31■□□□□ 0.2
LCNL1Q6ZST4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.31■□□□□ 0.2
LCNL1Q6ZST4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.31■□□□□ 0.2
LCNL1Q6ZST4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LCNL1Q6ZST4 AC231657.2-201ENST00000624556 255 ntBASIC16.31■□□□□ 0.2
LCNL1Q6ZST4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LCNL1Q6ZST4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCNL1Q6ZST4 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCNL1Q6ZST4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCNL1Q6ZST4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCNL1Q6ZST4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.31■□□□□ 0.2
LCNL1Q6ZST4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
LCNL1Q6ZST4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LCNL1Q6ZST4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LCNL1Q6ZST4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC16.3■□□□□ 0.2
LCNL1Q6ZST4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.3■□□□□ 0.2
LCNL1Q6ZST4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LCNL1Q6ZST4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC16.3■□□□□ 0.2
LCNL1Q6ZST4 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LCNL1Q6ZST4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCNL1Q6ZST4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCNL1Q6ZST4 BID-212ENST00000614949 1988 ntTSL 5 BASIC16.3■□□□□ 0.2
LCNL1Q6ZST4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.3■□□□□ 0.2
LCNL1Q6ZST4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCNL1Q6ZST4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LCNL1Q6ZST4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCNL1Q6ZST4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.3■□□□□ 0.2
LCNL1Q6ZST4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.3■□□□□ 0.2
LCNL1Q6ZST4 SLC7A5P1-201ENST00000568957 537 ntBASIC16.3■□□□□ 0.2
LCNL1Q6ZST4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.3■□□□□ 0.2
LCNL1Q6ZST4 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCNL1Q6ZST4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LCNL1Q6ZST4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
LCNL1Q6ZST4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCNL1Q6ZST4 WWC2-AS2-201ENST00000578387 2183 ntBASIC16.3■□□□□ 0.2
LCNL1Q6ZST4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCNL1Q6ZST4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCNL1Q6ZST4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LCNL1Q6ZST4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.29■□□□□ 0.2
LCNL1Q6ZST4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC16.29■□□□□ 0.2
LCNL1Q6ZST4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LCNL1Q6ZST4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LCNL1Q6ZST4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LCNL1Q6ZST4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LCNL1Q6ZST4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.29■□□□□ 0.2
LCNL1Q6ZST4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LCNL1Q6ZST4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
LCNL1Q6ZST4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LCNL1Q6ZST4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LCNL1Q6ZST4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
LCNL1Q6ZST4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LCNL1Q6ZST4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LCNL1Q6ZST4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
LCNL1Q6ZST4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
LCNL1Q6ZST4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LCNL1Q6ZST4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LCNL1Q6ZST4 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.29■□□□□ 0.2
LCNL1Q6ZST4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LCNL1Q6ZST4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LCNL1Q6ZST4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LCNL1Q6ZST4 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LCNL1Q6ZST4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LCNL1Q6ZST4 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LCNL1Q6ZST4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC16.28■□□□□ 0.2
LCNL1Q6ZST4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
LCNL1Q6ZST4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
LCNL1Q6ZST4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LCNL1Q6ZST4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.28■□□□□ 0.2
LCNL1Q6ZST4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LCNL1Q6ZST4 AC013268.1-206ENST00000638368 961 ntBASIC16.28■□□□□ 0.2
LCNL1Q6ZST4 AC112229.1-201ENST00000639295 961 ntBASIC16.28■□□□□ 0.2
LCNL1Q6ZST4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LCNL1Q6ZST4 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LCNL1Q6ZST4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC16.28■□□□□ 0.2
LCNL1Q6ZST4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LCNL1Q6ZST4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LCNL1Q6ZST4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LCNL1Q6ZST4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LCNL1Q6ZST4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LCNL1Q6ZST4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LCNL1Q6ZST4 RBM17P2-201ENST00000616397 1405 ntBASIC16.28■□□□□ 0.2
LCNL1Q6ZST4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LCNL1Q6ZST4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
LCNL1Q6ZST4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LCNL1Q6ZST4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LCNL1Q6ZST4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LCNL1Q6ZST4 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.27■□□□□ 0.2
LCNL1Q6ZST4 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LCNL1Q6ZST4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.27■□□□□ 0.2
LCNL1Q6ZST4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.27■□□□□ 0.2
LCNL1Q6ZST4 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.27■□□□□ 0.2
LCNL1Q6ZST4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.27■□□□□ 0.2
LCNL1Q6ZST4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.27■□□□□ 0.2
LCNL1Q6ZST4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
LCNL1Q6ZST4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms