Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
COLCA1Q6ZS62 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.87■□□□□ 0.45
COLCA1Q6ZS62 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.87■□□□□ 0.45
COLCA1Q6ZS62 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.87■□□□□ 0.45
COLCA1Q6ZS62 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COLCA1Q6ZS62 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COLCA1Q6ZS62 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COLCA1Q6ZS62 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.87■□□□□ 0.45
COLCA1Q6ZS62 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
COLCA1Q6ZS62 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COLCA1Q6ZS62 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
COLCA1Q6ZS62 AC116050.2-201ENST00000612102 1779 ntBASIC17.86■□□□□ 0.45
COLCA1Q6ZS62 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
COLCA1Q6ZS62 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
COLCA1Q6ZS62 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COLCA1Q6ZS62 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
COLCA1Q6ZS62 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.86■□□□□ 0.45
COLCA1Q6ZS62 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
COLCA1Q6ZS62 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.86■□□□□ 0.45
COLCA1Q6ZS62 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COLCA1Q6ZS62 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COLCA1Q6ZS62 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
COLCA1Q6ZS62 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COLCA1Q6ZS62 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COLCA1Q6ZS62 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
COLCA1Q6ZS62 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
COLCA1Q6ZS62 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
COLCA1Q6ZS62 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COLCA1Q6ZS62 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
COLCA1Q6ZS62 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
COLCA1Q6ZS62 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COLCA1Q6ZS62 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COLCA1Q6ZS62 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COLCA1Q6ZS62 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
COLCA1Q6ZS62 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COLCA1Q6ZS62 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
COLCA1Q6ZS62 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
COLCA1Q6ZS62 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COLCA1Q6ZS62 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
COLCA1Q6ZS62 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
COLCA1Q6ZS62 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COLCA1Q6ZS62 AC006015.1-201ENST00000429970 570 ntBASIC17.85■□□□□ 0.45
COLCA1Q6ZS62 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.85■□□□□ 0.45
COLCA1Q6ZS62 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.85■□□□□ 0.45
COLCA1Q6ZS62 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
COLCA1Q6ZS62 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
COLCA1Q6ZS62 AC137761.2-201ENST00000561729 223 ntBASIC17.85■□□□□ 0.45
COLCA1Q6ZS62 AC145350.3-201ENST00000569033 163 ntBASIC17.85■□□□□ 0.45
COLCA1Q6ZS62 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
COLCA1Q6ZS62 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
COLCA1Q6ZS62 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COLCA1Q6ZS62 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.85■□□□□ 0.45
COLCA1Q6ZS62 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COLCA1Q6ZS62 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.85■□□□□ 0.45
COLCA1Q6ZS62 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.85■□□□□ 0.45
COLCA1Q6ZS62 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COLCA1Q6ZS62 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
COLCA1Q6ZS62 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
COLCA1Q6ZS62 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
COLCA1Q6ZS62 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COLCA1Q6ZS62 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COLCA1Q6ZS62 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COLCA1Q6ZS62 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.84■□□□□ 0.45
COLCA1Q6ZS62 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COLCA1Q6ZS62 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
COLCA1Q6ZS62 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
COLCA1Q6ZS62 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COLCA1Q6ZS62 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.84■□□□□ 0.45
COLCA1Q6ZS62 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.84■□□□□ 0.45
COLCA1Q6ZS62 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.84■□□□□ 0.45
COLCA1Q6ZS62 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.84■□□□□ 0.45
COLCA1Q6ZS62 AC010536.3-201ENST00000620306 533 ntBASIC17.84■□□□□ 0.45
COLCA1Q6ZS62 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COLCA1Q6ZS62 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
COLCA1Q6ZS62 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.84■□□□□ 0.45
COLCA1Q6ZS62 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
COLCA1Q6ZS62 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.84■□□□□ 0.45
COLCA1Q6ZS62 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
COLCA1Q6ZS62 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
COLCA1Q6ZS62 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.83■□□□□ 0.45
COLCA1Q6ZS62 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
COLCA1Q6ZS62 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COLCA1Q6ZS62 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.83■□□□□ 0.44
COLCA1Q6ZS62 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.83■□□□□ 0.44
COLCA1Q6ZS62 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.83■□□□□ 0.44
COLCA1Q6ZS62 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
COLCA1Q6ZS62 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
COLCA1Q6ZS62 TERF1P5-201ENST00000477545 1207 ntBASIC17.83■□□□□ 0.44
COLCA1Q6ZS62 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.83■□□□□ 0.44
COLCA1Q6ZS62 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
COLCA1Q6ZS62 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
COLCA1Q6ZS62 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.83■□□□□ 0.44
COLCA1Q6ZS62 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
COLCA1Q6ZS62 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.83■□□□□ 0.44
COLCA1Q6ZS62 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COLCA1Q6ZS62 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
COLCA1Q6ZS62 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COLCA1Q6ZS62 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COLCA1Q6ZS62 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.82■□□□□ 0.44
COLCA1Q6ZS62 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms