Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF111Q6ZNA4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF111Q6ZNA4 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
RNF111Q6ZNA4 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.09■□□□□ 0.81
RNF111Q6ZNA4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.09■□□□□ 0.81
RNF111Q6ZNA4 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.09■□□□□ 0.81
RNF111Q6ZNA4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
RNF111Q6ZNA4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RNF111Q6ZNA4 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF111Q6ZNA4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.09■□□□□ 0.81
RNF111Q6ZNA4 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF111Q6ZNA4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.09■□□□□ 0.81
RNF111Q6ZNA4 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF111Q6ZNA4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF111Q6ZNA4 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF111Q6ZNA4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.08■□□□□ 0.81
RNF111Q6ZNA4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.08■□□□□ 0.81
RNF111Q6ZNA4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
RNF111Q6ZNA4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.08■□□□□ 0.81
RNF111Q6ZNA4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF111Q6ZNA4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF111Q6ZNA4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF111Q6ZNA4 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.08■□□□□ 0.81
RNF111Q6ZNA4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF111Q6ZNA4 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.08■□□□□ 0.81
RNF111Q6ZNA4 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
RNF111Q6ZNA4 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF111Q6ZNA4 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF111Q6ZNA4 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
RNF111Q6ZNA4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.08■□□□□ 0.81
RNF111Q6ZNA4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.08■□□□□ 0.81
RNF111Q6ZNA4 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF111Q6ZNA4 MIR6084-201ENST00000622012 110 ntBASIC20.08■□□□□ 0.81
RNF111Q6ZNA4 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RNF111Q6ZNA4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
RNF111Q6ZNA4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
RNF111Q6ZNA4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF111Q6ZNA4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF111Q6ZNA4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF111Q6ZNA4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF111Q6ZNA4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.07■□□□□ 0.8
RNF111Q6ZNA4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.07■□□□□ 0.8
RNF111Q6ZNA4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF111Q6ZNA4 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF111Q6ZNA4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF111Q6ZNA4 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.07■□□□□ 0.8
RNF111Q6ZNA4 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.07■□□□□ 0.8
RNF111Q6ZNA4 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF111Q6ZNA4 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF111Q6ZNA4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
RNF111Q6ZNA4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.07■□□□□ 0.8
RNF111Q6ZNA4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF111Q6ZNA4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF111Q6ZNA4 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF111Q6ZNA4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF111Q6ZNA4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RNF111Q6ZNA4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF111Q6ZNA4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RNF111Q6ZNA4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RNF111Q6ZNA4 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RNF111Q6ZNA4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.06■□□□□ 0.8
RNF111Q6ZNA4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF111Q6ZNA4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF111Q6ZNA4 AC104564.3-201ENST00000582367 638 ntBASIC20.06■□□□□ 0.8
RNF111Q6ZNA4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF111Q6ZNA4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF111Q6ZNA4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF111Q6ZNA4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RNF111Q6ZNA4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
RNF111Q6ZNA4 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.05■□□□□ 0.8
RNF111Q6ZNA4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF111Q6ZNA4 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF111Q6ZNA4 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.05■□□□□ 0.8
RNF111Q6ZNA4 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.05■□□□□ 0.8
RNF111Q6ZNA4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF111Q6ZNA4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.05■□□□□ 0.8
RNF111Q6ZNA4 AL034346.1-201ENST00000568244 1277 ntBASIC20.05■□□□□ 0.8
RNF111Q6ZNA4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF111Q6ZNA4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF111Q6ZNA4 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.05■□□□□ 0.8
RNF111Q6ZNA4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF111Q6ZNA4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
RNF111Q6ZNA4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
RNF111Q6ZNA4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
RNF111Q6ZNA4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
RNF111Q6ZNA4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF111Q6ZNA4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF111Q6ZNA4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.05■□□□□ 0.8
RNF111Q6ZNA4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.05■□□□□ 0.8
RNF111Q6ZNA4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF111Q6ZNA4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
RNF111Q6ZNA4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
RNF111Q6ZNA4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF111Q6ZNA4 BX005040.4-201ENST00000637145 1518 ntBASIC20.04■□□□□ 0.8
RNF111Q6ZNA4 AC027612.3-201ENST00000413684 1047 ntBASIC20.04■□□□□ 0.8
RNF111Q6ZNA4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.04■□□□□ 0.8
RNF111Q6ZNA4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF111Q6ZNA4 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF111Q6ZNA4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF111Q6ZNA4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms