Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
C11orf88Q6PI97 DUX4L4-201ENST00000566884 1269 ntBASIC17.94■□□□□ 0.46
C11orf88Q6PI97 AL031432.3-201ENST00000607698 485 ntBASIC17.94■□□□□ 0.46
C11orf88Q6PI97 AC011298.3-201ENST00000615796 283 ntBASIC17.94■□□□□ 0.46
C11orf88Q6PI97 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
C11orf88Q6PI97 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
C11orf88Q6PI97 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
C11orf88Q6PI97 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.94■□□□□ 0.46
C11orf88Q6PI97 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
C11orf88Q6PI97 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
C11orf88Q6PI97 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
C11orf88Q6PI97 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.94■□□□□ 0.46
C11orf88Q6PI97 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
C11orf88Q6PI97 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
C11orf88Q6PI97 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
C11orf88Q6PI97 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
C11orf88Q6PI97 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
C11orf88Q6PI97 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.93■□□□□ 0.46
C11orf88Q6PI97 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
C11orf88Q6PI97 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
C11orf88Q6PI97 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
C11orf88Q6PI97 AC091305.1-201ENST00000479476 895 ntBASIC17.93■□□□□ 0.46
C11orf88Q6PI97 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.93■□□□□ 0.46
C11orf88Q6PI97 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
C11orf88Q6PI97 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
C11orf88Q6PI97 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
C11orf88Q6PI97 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
C11orf88Q6PI97 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
C11orf88Q6PI97 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
C11orf88Q6PI97 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
C11orf88Q6PI97 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
C11orf88Q6PI97 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
C11orf88Q6PI97 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
C11orf88Q6PI97 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
C11orf88Q6PI97 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
C11orf88Q6PI97 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
C11orf88Q6PI97 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
C11orf88Q6PI97 AC020763.4-201ENST00000623414 4170 ntBASIC17.92■□□□□ 0.46
C11orf88Q6PI97 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
C11orf88Q6PI97 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
C11orf88Q6PI97 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.92■□□□□ 0.46
C11orf88Q6PI97 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
C11orf88Q6PI97 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
C11orf88Q6PI97 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
C11orf88Q6PI97 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
C11orf88Q6PI97 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
C11orf88Q6PI97 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
C11orf88Q6PI97 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.92■□□□□ 0.46
C11orf88Q6PI97 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.92■□□□□ 0.46
C11orf88Q6PI97 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
C11orf88Q6PI97 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
C11orf88Q6PI97 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
C11orf88Q6PI97 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
C11orf88Q6PI97 AC104564.3-201ENST00000582367 638 ntBASIC17.92■□□□□ 0.46
C11orf88Q6PI97 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.92■□□□□ 0.46
C11orf88Q6PI97 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.92■□□□□ 0.46
C11orf88Q6PI97 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
C11orf88Q6PI97 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
C11orf88Q6PI97 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
C11orf88Q6PI97 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
C11orf88Q6PI97 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
C11orf88Q6PI97 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
C11orf88Q6PI97 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
C11orf88Q6PI97 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.91■□□□□ 0.46
C11orf88Q6PI97 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
C11orf88Q6PI97 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
C11orf88Q6PI97 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
C11orf88Q6PI97 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
C11orf88Q6PI97 PCDHAC2-203ENST00000615316 3011 ntBASIC17.91■□□□□ 0.46
C11orf88Q6PI97 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
C11orf88Q6PI97 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
C11orf88Q6PI97 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
C11orf88Q6PI97 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
C11orf88Q6PI97 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
C11orf88Q6PI97 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
C11orf88Q6PI97 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.91■□□□□ 0.46
C11orf88Q6PI97 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.91■□□□□ 0.46
C11orf88Q6PI97 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.91■□□□□ 0.46
C11orf88Q6PI97 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.91■□□□□ 0.46
C11orf88Q6PI97 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
C11orf88Q6PI97 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.91■□□□□ 0.46
C11orf88Q6PI97 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
C11orf88Q6PI97 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.91■□□□□ 0.46
C11orf88Q6PI97 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
C11orf88Q6PI97 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
C11orf88Q6PI97 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
C11orf88Q6PI97 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
C11orf88Q6PI97 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
C11orf88Q6PI97 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
C11orf88Q6PI97 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
C11orf88Q6PI97 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.9■□□□□ 0.46
C11orf88Q6PI97 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
C11orf88Q6PI97 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
C11orf88Q6PI97 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
C11orf88Q6PI97 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
C11orf88Q6PI97 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
C11orf88Q6PI97 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
C11orf88Q6PI97 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
C11orf88Q6PI97 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
C11orf88Q6PI97 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms