Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF549Q6P9A3 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
ZNF549Q6P9A3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ZNF549Q6P9A3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
ZNF549Q6P9A3 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF549Q6P9A3 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ZNF549Q6P9A3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.57■□□□□ 0.88
ZNF549Q6P9A3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF549Q6P9A3 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF549Q6P9A3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ZNF549Q6P9A3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.57■□□□□ 0.88
ZNF549Q6P9A3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF549Q6P9A3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF549Q6P9A3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF549Q6P9A3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF549Q6P9A3 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF549Q6P9A3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF549Q6P9A3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF549Q6P9A3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF549Q6P9A3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
ZNF549Q6P9A3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF549Q6P9A3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF549Q6P9A3 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF549Q6P9A3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF549Q6P9A3 KRT16P2-201ENST00000414673 1423 ntBASIC20.56■□□□□ 0.88
ZNF549Q6P9A3 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF549Q6P9A3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF549Q6P9A3 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.56■□□□□ 0.88
ZNF549Q6P9A3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.56■□□□□ 0.88
ZNF549Q6P9A3 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF549Q6P9A3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.56■□□□□ 0.88
ZNF549Q6P9A3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.56■□□□□ 0.88
ZNF549Q6P9A3 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF549Q6P9A3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF549Q6P9A3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF549Q6P9A3 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF549Q6P9A3 FEM1AP1-201ENST00000431297 1995 ntBASIC20.55■□□□□ 0.88
ZNF549Q6P9A3 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ZNF549Q6P9A3 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF549Q6P9A3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
ZNF549Q6P9A3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF549Q6P9A3 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF549Q6P9A3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.55■□□□□ 0.88
ZNF549Q6P9A3 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF549Q6P9A3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.55■□□□□ 0.88
ZNF549Q6P9A3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
ZNF549Q6P9A3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF549Q6P9A3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF549Q6P9A3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF549Q6P9A3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.55■□□□□ 0.88
ZNF549Q6P9A3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF549Q6P9A3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.54■□□□□ 0.88
ZNF549Q6P9A3 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
ZNF549Q6P9A3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF549Q6P9A3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.54■□□□□ 0.88
ZNF549Q6P9A3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF549Q6P9A3 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.54■□□□□ 0.88
ZNF549Q6P9A3 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.54■□□□□ 0.88
ZNF549Q6P9A3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
ZNF549Q6P9A3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.54■□□□□ 0.88
ZNF549Q6P9A3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
ZNF549Q6P9A3 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
ZNF549Q6P9A3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF549Q6P9A3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF549Q6P9A3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF549Q6P9A3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF549Q6P9A3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF549Q6P9A3 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.53■□□□□ 0.88
ZNF549Q6P9A3 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF549Q6P9A3 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF549Q6P9A3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF549Q6P9A3 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF549Q6P9A3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF549Q6P9A3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF549Q6P9A3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF549Q6P9A3 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.53■□□□□ 0.88
ZNF549Q6P9A3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.53■□□□□ 0.88
ZNF549Q6P9A3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF549Q6P9A3 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF549Q6P9A3 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF549Q6P9A3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF549Q6P9A3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF549Q6P9A3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF549Q6P9A3 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
ZNF549Q6P9A3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF549Q6P9A3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF549Q6P9A3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF549Q6P9A3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF549Q6P9A3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
ZNF549Q6P9A3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
ZNF549Q6P9A3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF549Q6P9A3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.52■□□□□ 0.88
ZNF549Q6P9A3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
ZNF549Q6P9A3 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF549Q6P9A3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF549Q6P9A3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.52■□□□□ 0.88
ZNF549Q6P9A3 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
ZNF549Q6P9A3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF549Q6P9A3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF549Q6P9A3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms