Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
KRT40Q6A162 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
KRT40Q6A162 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC24.01■■□□□ 1.43
KRT40Q6A162 KRT16P2-201ENST00000414673 1423 ntBASIC24.01■■□□□ 1.43
KRT40Q6A162 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
KRT40Q6A162 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
KRT40Q6A162 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC24■■□□□ 1.43
KRT40Q6A162 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
KRT40Q6A162 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC24■■□□□ 1.43
KRT40Q6A162 AC016769.1-201ENST00000409132 1010 ntBASIC24■■□□□ 1.43
KRT40Q6A162 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC24■■□□□ 1.43
KRT40Q6A162 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC24■■□□□ 1.43
KRT40Q6A162 AC137761.2-201ENST00000561729 223 ntBASIC24■■□□□ 1.43
KRT40Q6A162 AC145350.3-201ENST00000569033 163 ntBASIC24■■□□□ 1.43
KRT40Q6A162 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
KRT40Q6A162 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
KRT40Q6A162 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC24■■□□□ 1.43
KRT40Q6A162 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
KRT40Q6A162 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC24■■□□□ 1.43
KRT40Q6A162 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC24■■□□□ 1.43
KRT40Q6A162 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
KRT40Q6A162 AC121338.2-201ENST00000622535 1744 ntBASIC23.99■■□□□ 1.43
KRT40Q6A162 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
KRT40Q6A162 AC026185.1-201ENST00000445748 174 ntBASIC23.99■■□□□ 1.43
KRT40Q6A162 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC23.99■■□□□ 1.43
KRT40Q6A162 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC23.99■■□□□ 1.43
KRT40Q6A162 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
KRT40Q6A162 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC23.99■■□□□ 1.43
KRT40Q6A162 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
KRT40Q6A162 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
KRT40Q6A162 EXOC3-AS1-202ENST00000623673 1663 ntBASIC23.99■■□□□ 1.43
KRT40Q6A162 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
KRT40Q6A162 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
KRT40Q6A162 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
KRT40Q6A162 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
KRT40Q6A162 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC23.98■■□□□ 1.43
KRT40Q6A162 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC23.98■■□□□ 1.43
KRT40Q6A162 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.98■■□□□ 1.43
KRT40Q6A162 AL109923.1-201ENST00000618799 583 ntBASIC23.98■■□□□ 1.43
KRT40Q6A162 AC006128.1-201ENST00000624704 1661 ntBASIC23.98■■□□□ 1.43
KRT40Q6A162 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC23.98■■□□□ 1.43
KRT40Q6A162 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
KRT40Q6A162 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
KRT40Q6A162 ERF-202ENST00000440177 2032 ntTSL 2 BASIC23.98■■□□□ 1.43
KRT40Q6A162 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
KRT40Q6A162 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
KRT40Q6A162 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
KRT40Q6A162 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
KRT40Q6A162 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
KRT40Q6A162 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
KRT40Q6A162 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
KRT40Q6A162 CROCCP5-201ENST00000436658 830 ntBASIC23.97■■□□□ 1.43
KRT40Q6A162 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
KRT40Q6A162 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC23.97■■□□□ 1.43
KRT40Q6A162 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC23.97■■□□□ 1.43
KRT40Q6A162 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
KRT40Q6A162 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
KRT40Q6A162 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC23.97■■□□□ 1.43
KRT40Q6A162 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC23.97■■□□□ 1.43
KRT40Q6A162 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC23.96■■□□□ 1.43
KRT40Q6A162 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
KRT40Q6A162 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
KRT40Q6A162 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
KRT40Q6A162 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
KRT40Q6A162 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
KRT40Q6A162 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
KRT40Q6A162 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC23.96■■□□□ 1.43
KRT40Q6A162 AC120498.10-201ENST00000621827 505 ntBASIC23.96■■□□□ 1.43
KRT40Q6A162 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
KRT40Q6A162 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
KRT40Q6A162 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
KRT40Q6A162 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
KRT40Q6A162 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
KRT40Q6A162 PKD1P6-201ENST00000343738 4769 ntBASIC23.96■■□□□ 1.43
KRT40Q6A162 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
KRT40Q6A162 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
KRT40Q6A162 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
KRT40Q6A162 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC23.96■■□□□ 1.43
KRT40Q6A162 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
KRT40Q6A162 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
KRT40Q6A162 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC23.95■■□□□ 1.43
KRT40Q6A162 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
KRT40Q6A162 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC23.95■■□□□ 1.42
KRT40Q6A162 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
KRT40Q6A162 STX7-201ENST00000367937 1090 ntTSL 5 BASIC23.95■■□□□ 1.42
KRT40Q6A162 KRT18P20-201ENST00000548986 1279 ntBASIC23.95■■□□□ 1.42
KRT40Q6A162 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
KRT40Q6A162 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC23.95■■□□□ 1.42
KRT40Q6A162 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
KRT40Q6A162 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
KRT40Q6A162 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
KRT40Q6A162 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC23.95■■□□□ 1.42
KRT40Q6A162 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
KRT40Q6A162 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
KRT40Q6A162 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
KRT40Q6A162 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
KRT40Q6A162 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
KRT40Q6A162 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
KRT40Q6A162 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC23.94■■□□□ 1.42
KRT40Q6A162 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC23.94■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms