Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RNF213Q63HN8 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RNF213Q63HN8 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC11.23□□□□□ -0.61
RNF213Q63HN8 AL355355.2-201ENST00000442321 338 ntBASIC11.23□□□□□ -0.61
RNF213Q63HN8 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC11.23□□□□□ -0.61
RNF213Q63HN8 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC11.23□□□□□ -0.61
RNF213Q63HN8 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RNF213Q63HN8 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RNF213Q63HN8 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RNF213Q63HN8 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
RNF213Q63HN8 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RNF213Q63HN8 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RNF213Q63HN8 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RNF213Q63HN8 AK4P3-201ENST00000418260 669 ntBASIC11.23□□□□□ -0.61
RNF213Q63HN8 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC11.23□□□□□ -0.61
RNF213Q63HN8 AC100791.3-201ENST00000617619 330 ntBASIC11.23□□□□□ -0.61
RNF213Q63HN8 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RNF213Q63HN8 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RNF213Q63HN8 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
RNF213Q63HN8 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RNF213Q63HN8 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC11.23□□□□□ -0.61
RNF213Q63HN8 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC11.23□□□□□ -0.61
RNF213Q63HN8 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RNF213Q63HN8 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RNF213Q63HN8 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC11.23□□□□□ -0.61
RNF213Q63HN8 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RNF213Q63HN8 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
RNF213Q63HN8 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
RNF213Q63HN8 FAM197Y1-201ENST00000421178 764 ntBASIC11.23□□□□□ -0.61
RNF213Q63HN8 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC11.23□□□□□ -0.61
RNF213Q63HN8 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC11.23□□□□□ -0.61
RNF213Q63HN8 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
RNF213Q63HN8 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC11.23□□□□□ -0.61
RNF213Q63HN8 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
RNF213Q63HN8 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
RNF213Q63HN8 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC11.22□□□□□ -0.61
RNF213Q63HN8 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RNF213Q63HN8 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RNF213Q63HN8 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RNF213Q63HN8 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC11.22□□□□□ -0.61
RNF213Q63HN8 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC11.22□□□□□ -0.61
RNF213Q63HN8 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC11.22□□□□□ -0.61
RNF213Q63HN8 RN7SL510P-201ENST00000581311 263 ntBASIC11.22□□□□□ -0.61
RNF213Q63HN8 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RNF213Q63HN8 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RNF213Q63HN8 PRR31-201ENST00000371629 978 ntTSL 2 BASIC11.22□□□□□ -0.61
RNF213Q63HN8 AL022342.1-201ENST00000400363 863 ntBASIC11.22□□□□□ -0.61
RNF213Q63HN8 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC11.22□□□□□ -0.61
RNF213Q63HN8 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC11.22□□□□□ -0.61
RNF213Q63HN8 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
RNF213Q63HN8 AL353803.4-201ENST00000565882 1934 ntBASIC11.22□□□□□ -0.61
RNF213Q63HN8 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC11.22□□□□□ -0.61
RNF213Q63HN8 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
RNF213Q63HN8 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC11.22□□□□□ -0.61
RNF213Q63HN8 UNC93B7-201ENST00000509439 705 ntBASIC11.22□□□□□ -0.61
RNF213Q63HN8 CD320-202ENST00000537716 1119 ntTSL 2 BASIC11.22□□□□□ -0.61
RNF213Q63HN8 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RNF213Q63HN8 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
RNF213Q63HN8 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RNF213Q63HN8 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
RNF213Q63HN8 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
RNF213Q63HN8 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
RNF213Q63HN8 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RNF213Q63HN8 LINC01238-205ENST00000567549 1107 ntBASIC11.22□□□□□ -0.61
RNF213Q63HN8 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC11.21□□□□□ -0.61
RNF213Q63HN8 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC11.21□□□□□ -0.61
RNF213Q63HN8 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
RNF213Q63HN8 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RNF213Q63HN8 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RNF213Q63HN8 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RNF213Q63HN8 ATP5G1P1-201ENST00000448724 379 ntBASIC11.21□□□□□ -0.61
RNF213Q63HN8 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC11.21□□□□□ -0.61
RNF213Q63HN8 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
RNF213Q63HN8 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RNF213Q63HN8 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RNF213Q63HN8 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC11.21□□□□□ -0.61
RNF213Q63HN8 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
RNF213Q63HN8 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC11.21□□□□□ -0.61
RNF213Q63HN8 KRT17P6-201ENST00000453795 1220 ntBASIC11.21□□□□□ -0.61
RNF213Q63HN8 FAM86EP-206ENST00000510506 987 ntBASIC11.21□□□□□ -0.61
RNF213Q63HN8 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC11.21□□□□□ -0.61
RNF213Q63HN8 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
RNF213Q63HN8 HTR7P1-201ENST00000538670 1336 ntBASIC11.21□□□□□ -0.61
RNF213Q63HN8 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
RNF213Q63HN8 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RNF213Q63HN8 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC11.21□□□□□ -0.62
RNF213Q63HN8 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
RNF213Q63HN8 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC11.21□□□□□ -0.62
RNF213Q63HN8 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.62
RNF213Q63HN8 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
RNF213Q63HN8 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
RNF213Q63HN8 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
RNF213Q63HN8 AL390719.1-204ENST00000412397 1219 ntBASIC11.21□□□□□ -0.62
RNF213Q63HN8 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC11.21□□□□□ -0.62
RNF213Q63HN8 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC11.21□□□□□ -0.62
RNF213Q63HN8 GXYLT1P4-201ENST00000613576 1192 ntBASIC11.21□□□□□ -0.62
RNF213Q63HN8 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC11.21□□□□□ -0.62
RNF213Q63HN8 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
RNF213Q63HN8 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC11.21□□□□□ -0.62
RNF213Q63HN8 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms