Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DQA1Q5Y7H0 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DQA1Q5Y7H0 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HLA-DQA1Q5Y7H0 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HLA-DQA1Q5Y7H0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
HLA-DQA1Q5Y7H0 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.33■□□□□ 0.69
HLA-DQA1Q5Y7H0 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HLA-DQA1Q5Y7H0 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.33■□□□□ 0.69
HLA-DQA1Q5Y7H0 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
HLA-DQA1Q5Y7H0 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.33■□□□□ 0.68
HLA-DQA1Q5Y7H0 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.33■□□□□ 0.68
HLA-DQA1Q5Y7H0 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.33■□□□□ 0.68
HLA-DQA1Q5Y7H0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.33■□□□□ 0.68
HLA-DQA1Q5Y7H0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.33■□□□□ 0.68
HLA-DQA1Q5Y7H0 AC010536.3-201ENST00000620306 533 ntBASIC19.33■□□□□ 0.68
HLA-DQA1Q5Y7H0 AC092437.1-201ENST00000624794 1048 ntBASIC19.33■□□□□ 0.68
HLA-DQA1Q5Y7H0 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HLA-DQA1Q5Y7H0 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
HLA-DQA1Q5Y7H0 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.33■□□□□ 0.68
HLA-DQA1Q5Y7H0 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HLA-DQA1Q5Y7H0 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HLA-DQA1Q5Y7H0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HLA-DQA1Q5Y7H0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
HLA-DQA1Q5Y7H0 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HLA-DQA1Q5Y7H0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
HLA-DQA1Q5Y7H0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
HLA-DQA1Q5Y7H0 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HLA-DQA1Q5Y7H0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.32■□□□□ 0.68
HLA-DQA1Q5Y7H0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DQA1Q5Y7H0 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DQA1Q5Y7H0 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
HLA-DQA1Q5Y7H0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.32■□□□□ 0.68
HLA-DQA1Q5Y7H0 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DQA1Q5Y7H0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DQA1Q5Y7H0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DQA1Q5Y7H0 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.32■□□□□ 0.68
HLA-DQA1Q5Y7H0 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.32■□□□□ 0.68
HLA-DQA1Q5Y7H0 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.32■□□□□ 0.68
HLA-DQA1Q5Y7H0 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.32■□□□□ 0.68
HLA-DQA1Q5Y7H0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.32■□□□□ 0.68
HLA-DQA1Q5Y7H0 MFSD11-216ENST00000590393 1141 ntBASIC19.32■□□□□ 0.68
HLA-DQA1Q5Y7H0 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.32■□□□□ 0.68
HLA-DQA1Q5Y7H0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DQA1Q5Y7H0 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DQA1Q5Y7H0 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DQA1Q5Y7H0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
HLA-DQA1Q5Y7H0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.31■□□□□ 0.68
HLA-DQA1Q5Y7H0 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DQA1Q5Y7H0 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
HLA-DQA1Q5Y7H0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DQA1Q5Y7H0 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DQA1Q5Y7H0 TERF1P5-201ENST00000477545 1207 ntBASIC19.31■□□□□ 0.68
HLA-DQA1Q5Y7H0 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.31■□□□□ 0.68
HLA-DQA1Q5Y7H0 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.31■□□□□ 0.68
HLA-DQA1Q5Y7H0 AC080038.1-201ENST00000611274 1154 ntBASIC19.31■□□□□ 0.68
HLA-DQA1Q5Y7H0 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.31■□□□□ 0.68
HLA-DQA1Q5Y7H0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
HLA-DQA1Q5Y7H0 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DQA1Q5Y7H0 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DQA1Q5Y7H0 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DQA1Q5Y7H0 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
HLA-DQA1Q5Y7H0 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DQA1Q5Y7H0 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DQA1Q5Y7H0 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DQA1Q5Y7H0 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.3■□□□□ 0.68
HLA-DQA1Q5Y7H0 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.3■□□□□ 0.68
HLA-DQA1Q5Y7H0 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.3■□□□□ 0.68
HLA-DQA1Q5Y7H0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.3■□□□□ 0.68
HLA-DQA1Q5Y7H0 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DQA1Q5Y7H0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DQA1Q5Y7H0 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DQA1Q5Y7H0 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
HLA-DQA1Q5Y7H0 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DQA1Q5Y7H0 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
HLA-DQA1Q5Y7H0 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.3■□□□□ 0.68
HLA-DQA1Q5Y7H0 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DQA1Q5Y7H0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
HLA-DQA1Q5Y7H0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DQA1Q5Y7H0 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DQA1Q5Y7H0 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DQA1Q5Y7H0 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DQA1Q5Y7H0 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.29■□□□□ 0.68
HLA-DQA1Q5Y7H0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.29■□□□□ 0.68
HLA-DQA1Q5Y7H0 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.29■□□□□ 0.68
HLA-DQA1Q5Y7H0 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.29■□□□□ 0.68
HLA-DQA1Q5Y7H0 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.29■□□□□ 0.68
HLA-DQA1Q5Y7H0 AC243732.1-201ENST00000612648 864 ntBASIC19.29■□□□□ 0.68
HLA-DQA1Q5Y7H0 AC013268.1-206ENST00000638368 961 ntBASIC19.29■□□□□ 0.68
HLA-DQA1Q5Y7H0 AC112229.1-201ENST00000639295 961 ntBASIC19.29■□□□□ 0.68
HLA-DQA1Q5Y7H0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DQA1Q5Y7H0 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DQA1Q5Y7H0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.29■□□□□ 0.68
HLA-DQA1Q5Y7H0 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.29■□□□□ 0.68
HLA-DQA1Q5Y7H0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DQA1Q5Y7H0 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DQA1Q5Y7H0 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DQA1Q5Y7H0 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.28■□□□□ 0.68
HLA-DQA1Q5Y7H0 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DQA1Q5Y7H0 RBM17P2-201ENST00000616397 1405 ntBASIC19.28■□□□□ 0.68
HLA-DQA1Q5Y7H0 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms