Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 AC013268.1-206ENST00000638368 961 ntBASIC21.58■■□□□ 1.05
TTC39BQ5VTQ0 AC112229.1-201ENST00000639295 961 ntBASIC21.58■■□□□ 1.05
TTC39BQ5VTQ0 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.58■■□□□ 1.04
TTC39BQ5VTQ0 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
TTC39BQ5VTQ0 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
TTC39BQ5VTQ0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.58■■□□□ 1.04
TTC39BQ5VTQ0 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
TTC39BQ5VTQ0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
TTC39BQ5VTQ0 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
TTC39BQ5VTQ0 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TTC39BQ5VTQ0 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
TTC39BQ5VTQ0 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TTC39BQ5VTQ0 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TTC39BQ5VTQ0 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
TTC39BQ5VTQ0 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TTC39BQ5VTQ0 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
TTC39BQ5VTQ0 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.57■■□□□ 1.04
TTC39BQ5VTQ0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
TTC39BQ5VTQ0 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.57■■□□□ 1.04
TTC39BQ5VTQ0 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.57■■□□□ 1.04
TTC39BQ5VTQ0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.57■■□□□ 1.04
TTC39BQ5VTQ0 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
TTC39BQ5VTQ0 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TTC39BQ5VTQ0 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.57■■□□□ 1.04
TTC39BQ5VTQ0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TTC39BQ5VTQ0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TTC39BQ5VTQ0 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.56■■□□□ 1.04
TTC39BQ5VTQ0 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.56■■□□□ 1.04
TTC39BQ5VTQ0 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TTC39BQ5VTQ0 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
TTC39BQ5VTQ0 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TTC39BQ5VTQ0 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
TTC39BQ5VTQ0 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.56■■□□□ 1.04
TTC39BQ5VTQ0 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TTC39BQ5VTQ0 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TTC39BQ5VTQ0 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.56■■□□□ 1.04
TTC39BQ5VTQ0 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TTC39BQ5VTQ0 TERF1P5-201ENST00000477545 1207 ntBASIC21.56■■□□□ 1.04
TTC39BQ5VTQ0 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TTC39BQ5VTQ0 AC007322.4-201ENST00000509611 723 ntBASIC21.56■■□□□ 1.04
TTC39BQ5VTQ0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.56■■□□□ 1.04
TTC39BQ5VTQ0 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.56■■□□□ 1.04
TTC39BQ5VTQ0 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.56■■□□□ 1.04
TTC39BQ5VTQ0 AC243732.1-201ENST00000612648 864 ntBASIC21.56■■□□□ 1.04
TTC39BQ5VTQ0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
TTC39BQ5VTQ0 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TTC39BQ5VTQ0 AF106564.1-201ENST00000607058 2553 ntBASIC21.56■■□□□ 1.04
TTC39BQ5VTQ0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TTC39BQ5VTQ0 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.56■■□□□ 1.04
TTC39BQ5VTQ0 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.56■■□□□ 1.04
TTC39BQ5VTQ0 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TTC39BQ5VTQ0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TTC39BQ5VTQ0 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.55■■□□□ 1.04
TTC39BQ5VTQ0 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TTC39BQ5VTQ0 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TTC39BQ5VTQ0 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TTC39BQ5VTQ0 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.55■■□□□ 1.04
TTC39BQ5VTQ0 AC007322.1-201ENST00000426983 750 ntBASIC21.55■■□□□ 1.04
TTC39BQ5VTQ0 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.55■■□□□ 1.04
TTC39BQ5VTQ0 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.55■■□□□ 1.04
TTC39BQ5VTQ0 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
TTC39BQ5VTQ0 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TTC39BQ5VTQ0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TTC39BQ5VTQ0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TTC39BQ5VTQ0 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.55■■□□□ 1.04
TTC39BQ5VTQ0 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TTC39BQ5VTQ0 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.54■■□□□ 1.04
TTC39BQ5VTQ0 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TTC39BQ5VTQ0 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
TTC39BQ5VTQ0 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TTC39BQ5VTQ0 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TTC39BQ5VTQ0 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
TTC39BQ5VTQ0 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
TTC39BQ5VTQ0 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.54■■□□□ 1.04
TTC39BQ5VTQ0 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TTC39BQ5VTQ0 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.54■■□□□ 1.04
TTC39BQ5VTQ0 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.54■■□□□ 1.04
TTC39BQ5VTQ0 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TTC39BQ5VTQ0 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.54■■□□□ 1.04
TTC39BQ5VTQ0 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TTC39BQ5VTQ0 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.54■■□□□ 1.04
TTC39BQ5VTQ0 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.54■■□□□ 1.04
TTC39BQ5VTQ0 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TTC39BQ5VTQ0 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
TTC39BQ5VTQ0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
TTC39BQ5VTQ0 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TTC39BQ5VTQ0 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
TTC39BQ5VTQ0 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TTC39BQ5VTQ0 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TTC39BQ5VTQ0 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
TTC39BQ5VTQ0 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.53■■□□□ 1.04
TTC39BQ5VTQ0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.53■■□□□ 1.04
TTC39BQ5VTQ0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.53■■□□□ 1.04
TTC39BQ5VTQ0 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
TTC39BQ5VTQ0 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TTC39BQ5VTQ0 RBM17P2-201ENST00000616397 1405 ntBASIC21.53■■□□□ 1.04
TTC39BQ5VTQ0 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.53■■□□□ 1.04
TTC39BQ5VTQ0 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
TTC39BQ5VTQ0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TTC39BQ5VTQ0 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms