Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC34.36■■■■□ 3.09
SNAPC4Q5SXM2 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
SNAPC4Q5SXM2 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC34.35■■■■□ 3.09
SNAPC4Q5SXM2 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC34.35■■■■□ 3.09
SNAPC4Q5SXM2 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC34.35■■■■□ 3.09
SNAPC4Q5SXM2 THEM4-205ENST00000489410 643 ntTSL 2 BASIC34.35■■■■□ 3.09
SNAPC4Q5SXM2 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC34.35■■■■□ 3.09
SNAPC4Q5SXM2 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC34.35■■■■□ 3.09
SNAPC4Q5SXM2 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC34.35■■■■□ 3.09
SNAPC4Q5SXM2 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC34.35■■■■□ 3.09
SNAPC4Q5SXM2 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
SNAPC4Q5SXM2 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC34.34■■■■□ 3.09
SNAPC4Q5SXM2 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC34.34■■■■□ 3.09
SNAPC4Q5SXM2 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC34.34■■■■□ 3.09
SNAPC4Q5SXM2 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC34.34■■■■□ 3.09
SNAPC4Q5SXM2 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC34.34■■■■□ 3.09
SNAPC4Q5SXM2 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC34.34■■■■□ 3.09
SNAPC4Q5SXM2 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC34.34■■■■□ 3.09
SNAPC4Q5SXM2 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC34.34■■■■□ 3.09
SNAPC4Q5SXM2 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC34.34■■■■□ 3.09
SNAPC4Q5SXM2 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
SNAPC4Q5SXM2 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC34.33■■■■□ 3.09
SNAPC4Q5SXM2 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC34.33■■■■□ 3.09
SNAPC4Q5SXM2 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC34.33■■■■□ 3.09
SNAPC4Q5SXM2 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC34.33■■■■□ 3.09
SNAPC4Q5SXM2 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
SNAPC4Q5SXM2 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC34.33■■■■□ 3.09
SNAPC4Q5SXM2 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC34.33■■■■□ 3.09
SNAPC4Q5SXM2 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC34.33■■■■□ 3.09
SNAPC4Q5SXM2 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
SNAPC4Q5SXM2 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
SNAPC4Q5SXM2 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC34.33■■■■□ 3.09
SNAPC4Q5SXM2 ARMC10P1-201ENST00000313754 855 ntBASIC34.33■■■■□ 3.09
SNAPC4Q5SXM2 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC34.33■■■■□ 3.09
SNAPC4Q5SXM2 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
SNAPC4Q5SXM2 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.09
SNAPC4Q5SXM2 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC34.32■■■■□ 3.09
SNAPC4Q5SXM2 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
SNAPC4Q5SXM2 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
SNAPC4Q5SXM2 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC34.32■■■■□ 3.08
SNAPC4Q5SXM2 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC34.32■■■■□ 3.08
SNAPC4Q5SXM2 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC34.32■■■■□ 3.08
SNAPC4Q5SXM2 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC34.32■■■■□ 3.08
SNAPC4Q5SXM2 AC087742.1-201ENST00000575880 1738 ntBASIC34.32■■■■□ 3.08
SNAPC4Q5SXM2 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC34.32■■■■□ 3.08
SNAPC4Q5SXM2 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
SNAPC4Q5SXM2 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC34.31■■■■□ 3.08
SNAPC4Q5SXM2 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC34.31■■■■□ 3.08
SNAPC4Q5SXM2 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC34.31■■■■□ 3.08
SNAPC4Q5SXM2 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
SNAPC4Q5SXM2 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
SNAPC4Q5SXM2 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC34.31■■■■□ 3.08
SNAPC4Q5SXM2 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC34.31■■■■□ 3.08
SNAPC4Q5SXM2 AC092865.7-201ENST00000641832 219 ntBASIC34.31■■■■□ 3.08
SNAPC4Q5SXM2 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC34.31■■■■□ 3.08
SNAPC4Q5SXM2 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
SNAPC4Q5SXM2 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC34.3■■■■□ 3.08
SNAPC4Q5SXM2 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC34.3■■■■□ 3.08
SNAPC4Q5SXM2 AC026471.5-201ENST00000615068 467 ntBASIC34.3■■■■□ 3.08
SNAPC4Q5SXM2 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC34.3■■■■□ 3.08
SNAPC4Q5SXM2 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC34.3■■■■□ 3.08
SNAPC4Q5SXM2 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
SNAPC4Q5SXM2 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
SNAPC4Q5SXM2 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC34.3■■■■□ 3.08
SNAPC4Q5SXM2 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC34.29■■■■□ 3.08
SNAPC4Q5SXM2 RNF146-204ENST00000476956 884 ntTSL 2 BASIC34.29■■■■□ 3.08
SNAPC4Q5SXM2 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC34.29■■■■□ 3.08
SNAPC4Q5SXM2 P4HB-223ENST00000576390 439 ntTSL 4 BASIC34.29■■■■□ 3.08
SNAPC4Q5SXM2 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
SNAPC4Q5SXM2 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC34.28■■■■□ 3.08
SNAPC4Q5SXM2 GGT1-206ENST00000404223 952 ntTSL 2 BASIC34.28■■■■□ 3.08
SNAPC4Q5SXM2 AL049597.2-201ENST00000565575 961 ntBASIC34.28■■■■□ 3.08
SNAPC4Q5SXM2 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
SNAPC4Q5SXM2 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
SNAPC4Q5SXM2 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
SNAPC4Q5SXM2 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC34.28■■■■□ 3.08
SNAPC4Q5SXM2 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC34.28■■■■□ 3.08
SNAPC4Q5SXM2 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC34.28■■■■□ 3.08
SNAPC4Q5SXM2 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC34.28■■■■□ 3.08
SNAPC4Q5SXM2 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC34.27■■■■□ 3.08
SNAPC4Q5SXM2 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC34.27■■■■□ 3.08
SNAPC4Q5SXM2 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC34.27■■■■□ 3.08
SNAPC4Q5SXM2 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC34.27■■■■□ 3.08
SNAPC4Q5SXM2 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
SNAPC4Q5SXM2 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC34.27■■■■□ 3.08
SNAPC4Q5SXM2 MIR6786-201ENST00000616843 113 ntBASIC34.27■■■■□ 3.08
SNAPC4Q5SXM2 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.08
SNAPC4Q5SXM2 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC34.26■■■■□ 3.08
SNAPC4Q5SXM2 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.08
SNAPC4Q5SXM2 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC34.26■■■■□ 3.07
SNAPC4Q5SXM2 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC34.26■■■■□ 3.07
SNAPC4Q5SXM2 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.07
SNAPC4Q5SXM2 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC34.26■■■■□ 3.07
SNAPC4Q5SXM2 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC34.26■■■■□ 3.07
SNAPC4Q5SXM2 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC34.26■■■■□ 3.07
SNAPC4Q5SXM2 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC34.26■■■■□ 3.07
SNAPC4Q5SXM2 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC34.26■■■■□ 3.07
SNAPC4Q5SXM2 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
SNAPC4Q5SXM2 AC139530.1-201ENST00000575312 1977 ntBASIC34.25■■■■□ 3.07
SNAPC4Q5SXM2 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms