Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNFT1Q5M7Z0 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RNFT1Q5M7Z0 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.74■□□□□ 0.59
RNFT1Q5M7Z0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.74■□□□□ 0.59
RNFT1Q5M7Z0 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.74■□□□□ 0.59
RNFT1Q5M7Z0 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.74■□□□□ 0.59
RNFT1Q5M7Z0 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNFT1Q5M7Z0 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RNFT1Q5M7Z0 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.74■□□□□ 0.59
RNFT1Q5M7Z0 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNFT1Q5M7Z0 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNFT1Q5M7Z0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.74■□□□□ 0.59
RNFT1Q5M7Z0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RNFT1Q5M7Z0 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNFT1Q5M7Z0 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
RNFT1Q5M7Z0 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNFT1Q5M7Z0 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNFT1Q5M7Z0 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNFT1Q5M7Z0 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.73■□□□□ 0.59
RNFT1Q5M7Z0 UNC93B5-201ENST00000530315 699 ntBASIC18.73■□□□□ 0.59
RNFT1Q5M7Z0 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNFT1Q5M7Z0 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.73■□□□□ 0.59
RNFT1Q5M7Z0 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNFT1Q5M7Z0 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
RNFT1Q5M7Z0 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNFT1Q5M7Z0 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNFT1Q5M7Z0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNFT1Q5M7Z0 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
RNFT1Q5M7Z0 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.72■□□□□ 0.59
RNFT1Q5M7Z0 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RNFT1Q5M7Z0 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RNFT1Q5M7Z0 ECEL1P1-201ENST00000373592 1742 ntBASIC18.72■□□□□ 0.59
RNFT1Q5M7Z0 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.72■□□□□ 0.59
RNFT1Q5M7Z0 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.72■□□□□ 0.59
RNFT1Q5M7Z0 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNFT1Q5M7Z0 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNFT1Q5M7Z0 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNFT1Q5M7Z0 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNFT1Q5M7Z0 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.72■□□□□ 0.59
RNFT1Q5M7Z0 KRT18P68-201ENST00000392293 1000 ntBASIC18.72■□□□□ 0.59
RNFT1Q5M7Z0 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNFT1Q5M7Z0 AC098590.1-201ENST00000468126 897 ntBASIC18.72■□□□□ 0.59
RNFT1Q5M7Z0 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
RNFT1Q5M7Z0 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.72■□□□□ 0.59
RNFT1Q5M7Z0 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNFT1Q5M7Z0 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNFT1Q5M7Z0 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNFT1Q5M7Z0 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNFT1Q5M7Z0 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNFT1Q5M7Z0 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNFT1Q5M7Z0 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNFT1Q5M7Z0 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.71■□□□□ 0.59
RNFT1Q5M7Z0 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNFT1Q5M7Z0 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNFT1Q5M7Z0 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.71■□□□□ 0.59
RNFT1Q5M7Z0 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNFT1Q5M7Z0 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNFT1Q5M7Z0 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNFT1Q5M7Z0 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNFT1Q5M7Z0 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNFT1Q5M7Z0 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNFT1Q5M7Z0 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RNFT1Q5M7Z0 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.71■□□□□ 0.59
RNFT1Q5M7Z0 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.71■□□□□ 0.59
RNFT1Q5M7Z0 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
RNFT1Q5M7Z0 AC006058.3-201ENST00000606217 1069 ntBASIC18.71■□□□□ 0.59
RNFT1Q5M7Z0 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNFT1Q5M7Z0 AL589743.5-201ENST00000616611 1050 ntBASIC18.71■□□□□ 0.59
RNFT1Q5M7Z0 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.71■□□□□ 0.59
RNFT1Q5M7Z0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.71■□□□□ 0.59
RNFT1Q5M7Z0 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RNFT1Q5M7Z0 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.7■□□□□ 0.58
RNFT1Q5M7Z0 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.7■□□□□ 0.58
RNFT1Q5M7Z0 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNFT1Q5M7Z0 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNFT1Q5M7Z0 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
RNFT1Q5M7Z0 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNFT1Q5M7Z0 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNFT1Q5M7Z0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RNFT1Q5M7Z0 RPS2P52-201ENST00000469610 820 ntBASIC18.7■□□□□ 0.58
RNFT1Q5M7Z0 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.7■□□□□ 0.58
RNFT1Q5M7Z0 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.7■□□□□ 0.58
RNFT1Q5M7Z0 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
RNFT1Q5M7Z0 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.7■□□□□ 0.58
RNFT1Q5M7Z0 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNFT1Q5M7Z0 CYP21A1P-202ENST00000354927 1481 ntBASIC18.7■□□□□ 0.58
RNFT1Q5M7Z0 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.7■□□□□ 0.58
RNFT1Q5M7Z0 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNFT1Q5M7Z0 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNFT1Q5M7Z0 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.69■□□□□ 0.58
RNFT1Q5M7Z0 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNFT1Q5M7Z0 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.69■□□□□ 0.58
RNFT1Q5M7Z0 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNFT1Q5M7Z0 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNFT1Q5M7Z0 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNFT1Q5M7Z0 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNFT1Q5M7Z0 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.69■□□□□ 0.58
RNFT1Q5M7Z0 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.69■□□□□ 0.58
RNFT1Q5M7Z0 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNFT1Q5M7Z0 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms