Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ATP13A4Q4VNC1 AP001160.3-201ENST00000601484 763 ntBASIC21.61■■□□□ 1.05
ATP13A4Q4VNC1 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.61■■□□□ 1.05
ATP13A4Q4VNC1 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATP13A4Q4VNC1 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATP13A4Q4VNC1 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.61■■□□□ 1.05
ATP13A4Q4VNC1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATP13A4Q4VNC1 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
ATP13A4Q4VNC1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
ATP13A4Q4VNC1 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ATP13A4Q4VNC1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATP13A4Q4VNC1 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATP13A4Q4VNC1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATP13A4Q4VNC1 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ATP13A4Q4VNC1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ATP13A4Q4VNC1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.6■■□□□ 1.05
ATP13A4Q4VNC1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.6■■□□□ 1.05
ATP13A4Q4VNC1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.6■■□□□ 1.05
ATP13A4Q4VNC1 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.6■■□□□ 1.05
ATP13A4Q4VNC1 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ATP13A4Q4VNC1 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ATP13A4Q4VNC1 LINC01521-201ENST00000504184 1943 ntBASIC21.6■■□□□ 1.05
ATP13A4Q4VNC1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATP13A4Q4VNC1 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
ATP13A4Q4VNC1 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATP13A4Q4VNC1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
ATP13A4Q4VNC1 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.59■■□□□ 1.05
ATP13A4Q4VNC1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATP13A4Q4VNC1 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATP13A4Q4VNC1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATP13A4Q4VNC1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ATP13A4Q4VNC1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATP13A4Q4VNC1 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ATP13A4Q4VNC1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
ATP13A4Q4VNC1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
ATP13A4Q4VNC1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
ATP13A4Q4VNC1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.59■■□□□ 1.05
ATP13A4Q4VNC1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.59■■□□□ 1.05
ATP13A4Q4VNC1 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.59■■□□□ 1.05
ATP13A4Q4VNC1 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.59■■□□□ 1.05
ATP13A4Q4VNC1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.59■■□□□ 1.05
ATP13A4Q4VNC1 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.59■■□□□ 1.05
ATP13A4Q4VNC1 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
ATP13A4Q4VNC1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.59■■□□□ 1.05
ATP13A4Q4VNC1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATP13A4Q4VNC1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.58■■□□□ 1.05
ATP13A4Q4VNC1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.58■■□□□ 1.05
ATP13A4Q4VNC1 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATP13A4Q4VNC1 SLC25A24-204ENST00000569674 2357 ntBASIC21.58■■□□□ 1.05
ATP13A4Q4VNC1 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
ATP13A4Q4VNC1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATP13A4Q4VNC1 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ATP13A4Q4VNC1 AC007225.1-201ENST00000566331 1836 ntBASIC21.58■■□□□ 1.05
ATP13A4Q4VNC1 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.58■■□□□ 1.05
ATP13A4Q4VNC1 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.58■■□□□ 1.05
ATP13A4Q4VNC1 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ATP13A4Q4VNC1 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ATP13A4Q4VNC1 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ATP13A4Q4VNC1 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.58■■□□□ 1.05
ATP13A4Q4VNC1 DUX4L2-201ENST00000561772 1275 ntBASIC21.58■■□□□ 1.05
ATP13A4Q4VNC1 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.58■■□□□ 1.05
ATP13A4Q4VNC1 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.58■■□□□ 1.05
ATP13A4Q4VNC1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.58■■□□□ 1.05
ATP13A4Q4VNC1 DUX4L6-201ENST00000626483 1275 ntBASIC21.58■■□□□ 1.05
ATP13A4Q4VNC1 DUX4L1-201ENST00000627662 1275 ntBASIC21.58■■□□□ 1.05
ATP13A4Q4VNC1 DUX4L8-201ENST00000629013 1275 ntBASIC21.58■■□□□ 1.05
ATP13A4Q4VNC1 DUX4L3-201ENST00000630187 1275 ntBASIC21.58■■□□□ 1.05
ATP13A4Q4VNC1 DUX4L7-201ENST00000630678 1275 ntBASIC21.58■■□□□ 1.05
ATP13A4Q4VNC1 DUX4L5-201ENST00000630834 1275 ntBASIC21.58■■□□□ 1.05
ATP13A4Q4VNC1 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
ATP13A4Q4VNC1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ATP13A4Q4VNC1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
ATP13A4Q4VNC1 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ATP13A4Q4VNC1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
ATP13A4Q4VNC1 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATP13A4Q4VNC1 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATP13A4Q4VNC1 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATP13A4Q4VNC1 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
ATP13A4Q4VNC1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATP13A4Q4VNC1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATP13A4Q4VNC1 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATP13A4Q4VNC1 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
ATP13A4Q4VNC1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.57■■□□□ 1.04
ATP13A4Q4VNC1 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.57■■□□□ 1.04
ATP13A4Q4VNC1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATP13A4Q4VNC1 AC011484.1-201ENST00000377652 1995 ntBASIC21.57■■□□□ 1.04
ATP13A4Q4VNC1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.57■■□□□ 1.04
ATP13A4Q4VNC1 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ATP13A4Q4VNC1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
ATP13A4Q4VNC1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.56■■□□□ 1.04
ATP13A4Q4VNC1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ATP13A4Q4VNC1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.56■■□□□ 1.04
ATP13A4Q4VNC1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
ATP13A4Q4VNC1 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.56■■□□□ 1.04
ATP13A4Q4VNC1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.56■■□□□ 1.04
ATP13A4Q4VNC1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.56■■□□□ 1.04
ATP13A4Q4VNC1 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATP13A4Q4VNC1 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATP13A4Q4VNC1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATP13A4Q4VNC1 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms