Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.98■□□□□ 0.79
PCDH1Q08174 AC034268.1-201ENST00000441047 882 ntBASIC19.98■□□□□ 0.79
PCDH1Q08174 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH1Q08174 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH1Q08174 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
PCDH1Q08174 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH1Q08174 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH1Q08174 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH1Q08174 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH1Q08174 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH1Q08174 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PCDH1Q08174 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.97■□□□□ 0.79
PCDH1Q08174 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH1Q08174 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.97■□□□□ 0.79
PCDH1Q08174 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH1Q08174 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH1Q08174 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PCDH1Q08174 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDH1Q08174 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH1Q08174 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.97■□□□□ 0.79
PCDH1Q08174 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH1Q08174 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH1Q08174 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH1Q08174 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH1Q08174 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH1Q08174 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
PCDH1Q08174 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH1Q08174 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH1Q08174 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDH1Q08174 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDH1Q08174 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH1Q08174 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.96■□□□□ 0.79
PCDH1Q08174 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDH1Q08174 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDH1Q08174 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.96■□□□□ 0.79
PCDH1Q08174 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH1Q08174 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH1Q08174 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH1Q08174 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH1Q08174 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDH1Q08174 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
PCDH1Q08174 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.96■□□□□ 0.79
PCDH1Q08174 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH1Q08174 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH1Q08174 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH1Q08174 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
PCDH1Q08174 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.79
PCDH1Q08174 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.95■□□□□ 0.78
PCDH1Q08174 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH1Q08174 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH1Q08174 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PCDH1Q08174 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH1Q08174 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
PCDH1Q08174 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDH1Q08174 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH1Q08174 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH1Q08174 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDH1Q08174 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH1Q08174 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDH1Q08174 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDH1Q08174 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.95■□□□□ 0.78
PCDH1Q08174 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.95■□□□□ 0.78
PCDH1Q08174 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
PCDH1Q08174 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH1Q08174 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH1Q08174 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.95■□□□□ 0.78
PCDH1Q08174 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH1Q08174 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH1Q08174 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH1Q08174 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.95■□□□□ 0.78
PCDH1Q08174 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH1Q08174 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH1Q08174 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH1Q08174 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDH1Q08174 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH1Q08174 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
PCDH1Q08174 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH1Q08174 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH1Q08174 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDH1Q08174 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.94■□□□□ 0.78
PCDH1Q08174 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.94■□□□□ 0.78
PCDH1Q08174 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PCDH1Q08174 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH1Q08174 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
PCDH1Q08174 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH1Q08174 RBM17P2-201ENST00000616397 1405 ntBASIC19.93■□□□□ 0.78
PCDH1Q08174 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH1Q08174 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH1Q08174 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
PCDH1Q08174 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH1Q08174 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PCDH1Q08174 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH1Q08174 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.93■□□□□ 0.78
PCDH1Q08174 MIR935-201ENST00000401179 91 ntBASIC19.93■□□□□ 0.78
PCDH1Q08174 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDH1Q08174 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.93■□□□□ 0.78
PCDH1Q08174 NTF6G-201ENST00000591094 616 ntBASIC19.93■□□□□ 0.78
PCDH1Q08174 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
PCDH1Q08174 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH1Q08174 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms