Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CFHR3Q02985 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CFHR3Q02985 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CFHR3Q02985 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CFHR3Q02985 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CFHR3Q02985 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.23■□□□□ 0.19
CFHR3Q02985 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CFHR3Q02985 GUSBP6-202ENST00000438529 1198 ntBASIC16.23■□□□□ 0.19
CFHR3Q02985 AC016405.3-201ENST00000607710 860 ntBASIC16.23■□□□□ 0.19
CFHR3Q02985 FAM21FP-204ENST00000608637 956 ntBASIC16.23■□□□□ 0.19
CFHR3Q02985 OR10C1-204ENST00000622521 1039 ntBASIC16.23■□□□□ 0.19
CFHR3Q02985 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CFHR3Q02985 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
CFHR3Q02985 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CFHR3Q02985 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC16.23■□□□□ 0.19
CFHR3Q02985 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.23■□□□□ 0.19
CFHR3Q02985 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CFHR3Q02985 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CFHR3Q02985 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
CFHR3Q02985 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CFHR3Q02985 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CFHR3Q02985 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.22■□□□□ 0.19
CFHR3Q02985 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC16.22■□□□□ 0.19
CFHR3Q02985 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CFHR3Q02985 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CFHR3Q02985 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CFHR3Q02985 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC16.22■□□□□ 0.19
CFHR3Q02985 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CFHR3Q02985 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.22■□□□□ 0.19
CFHR3Q02985 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CFHR3Q02985 GPX1P1-201ENST00000388829 606 ntBASIC16.22■□□□□ 0.19
CFHR3Q02985 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.22■□□□□ 0.19
CFHR3Q02985 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CFHR3Q02985 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CFHR3Q02985 HLA-L-209ENST00000420110 1011 ntBASIC16.22■□□□□ 0.19
CFHR3Q02985 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.22■□□□□ 0.19
CFHR3Q02985 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.22■□□□□ 0.19
CFHR3Q02985 PBX1-209ENST00000485769 834 ntTSL 2 BASIC16.22■□□□□ 0.19
CFHR3Q02985 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC16.22■□□□□ 0.19
CFHR3Q02985 RARRES2P4-201ENST00000514074 484 ntBASIC16.22■□□□□ 0.19
CFHR3Q02985 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.22■□□□□ 0.19
CFHR3Q02985 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CFHR3Q02985 AC104771.1-201ENST00000603335 964 ntBASIC16.22■□□□□ 0.19
CFHR3Q02985 AC069236.1-201ENST00000604339 616 ntBASIC16.22■□□□□ 0.19
CFHR3Q02985 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CFHR3Q02985 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.22■□□□□ 0.19
CFHR3Q02985 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CFHR3Q02985 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CFHR3Q02985 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CFHR3Q02985 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CFHR3Q02985 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CFHR3Q02985 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CFHR3Q02985 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CFHR3Q02985 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CFHR3Q02985 AC083906.2-201ENST00000511578 360 ntBASIC16.21■□□□□ 0.19
CFHR3Q02985 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CFHR3Q02985 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.21■□□□□ 0.19
CFHR3Q02985 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.21■□□□□ 0.19
CFHR3Q02985 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.21■□□□□ 0.19
CFHR3Q02985 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CFHR3Q02985 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
CFHR3Q02985 PALM-207ENST00000590161 2137 ntTSL 4 BASIC16.21■□□□□ 0.18
CFHR3Q02985 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.21■□□□□ 0.18
CFHR3Q02985 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
CFHR3Q02985 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CFHR3Q02985 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CFHR3Q02985 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CFHR3Q02985 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC16.2■□□□□ 0.18
CFHR3Q02985 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CFHR3Q02985 WWC2-AS2-201ENST00000578387 2183 ntBASIC16.2■□□□□ 0.18
CFHR3Q02985 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CFHR3Q02985 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.2■□□□□ 0.18
CFHR3Q02985 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CFHR3Q02985 AL512625.2-201ENST00000417533 625 ntBASIC16.2■□□□□ 0.18
CFHR3Q02985 TSPY6P-201ENST00000448518 926 ntBASIC16.2■□□□□ 0.18
CFHR3Q02985 CDV3P1-201ENST00000471403 739 ntBASIC16.2■□□□□ 0.18
CFHR3Q02985 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.2■□□□□ 0.18
CFHR3Q02985 AF201337.1-201ENST00000520239 748 ntBASIC16.2■□□□□ 0.18
CFHR3Q02985 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.2■□□□□ 0.18
CFHR3Q02985 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CFHR3Q02985 AL109923.1-201ENST00000618799 583 ntBASIC16.2■□□□□ 0.18
CFHR3Q02985 AC008694.1-202ENST00000636953 945 ntBASIC16.2■□□□□ 0.18
CFHR3Q02985 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CFHR3Q02985 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CFHR3Q02985 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CFHR3Q02985 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CFHR3Q02985 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CFHR3Q02985 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CFHR3Q02985 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC16.19■□□□□ 0.18
CFHR3Q02985 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CFHR3Q02985 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
CFHR3Q02985 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CFHR3Q02985 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CFHR3Q02985 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CFHR3Q02985 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CFHR3Q02985 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC16.19■□□□□ 0.18
CFHR3Q02985 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CFHR3Q02985 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC16.19■□□□□ 0.18
CFHR3Q02985 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CFHR3Q02985 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms