Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
HMGCS1Q01581 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.95■□□□□ 0.78
HMGCS1Q01581 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.95■□□□□ 0.78
HMGCS1Q01581 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
HMGCS1Q01581 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.95■□□□□ 0.78
HMGCS1Q01581 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HMGCS1Q01581 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.95■□□□□ 0.78
HMGCS1Q01581 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.95■□□□□ 0.78
HMGCS1Q01581 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGCS1Q01581 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.94■□□□□ 0.78
HMGCS1Q01581 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
HMGCS1Q01581 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGCS1Q01581 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGCS1Q01581 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
HMGCS1Q01581 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGCS1Q01581 AC027612.3-201ENST00000413684 1047 ntBASIC19.94■□□□□ 0.78
HMGCS1Q01581 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HMGCS1Q01581 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGCS1Q01581 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
HMGCS1Q01581 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HMGCS1Q01581 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGCS1Q01581 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
HMGCS1Q01581 AP005212.1-201ENST00000581547 1997 ntBASIC19.94■□□□□ 0.78
HMGCS1Q01581 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
HMGCS1Q01581 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGCS1Q01581 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.93■□□□□ 0.78
HMGCS1Q01581 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
HMGCS1Q01581 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.93■□□□□ 0.78
HMGCS1Q01581 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
HMGCS1Q01581 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGCS1Q01581 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HMGCS1Q01581 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HMGCS1Q01581 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.93■□□□□ 0.78
HMGCS1Q01581 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.93■□□□□ 0.78
HMGCS1Q01581 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HMGCS1Q01581 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGCS1Q01581 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGCS1Q01581 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HMGCS1Q01581 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGCS1Q01581 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCS1Q01581 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCS1Q01581 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCS1Q01581 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCS1Q01581 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCS1Q01581 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.92■□□□□ 0.78
HMGCS1Q01581 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.92■□□□□ 0.78
HMGCS1Q01581 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.92■□□□□ 0.78
HMGCS1Q01581 AC008175.2-201ENST00000612840 297 ntBASIC19.92■□□□□ 0.78
HMGCS1Q01581 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCS1Q01581 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCS1Q01581 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.92■□□□□ 0.78
HMGCS1Q01581 AC007225.1-201ENST00000566331 1836 ntBASIC19.92■□□□□ 0.78
HMGCS1Q01581 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
HMGCS1Q01581 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
HMGCS1Q01581 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCS1Q01581 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCS1Q01581 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCS1Q01581 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCS1Q01581 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMGCS1Q01581 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
HMGCS1Q01581 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMGCS1Q01581 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.91■□□□□ 0.78
HMGCS1Q01581 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.91■□□□□ 0.78
HMGCS1Q01581 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.91■□□□□ 0.78
HMGCS1Q01581 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMGCS1Q01581 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMGCS1Q01581 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.91■□□□□ 0.78
HMGCS1Q01581 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMGCS1Q01581 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.91■□□□□ 0.78
HMGCS1Q01581 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HMGCS1Q01581 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.91■□□□□ 0.78
HMGCS1Q01581 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.91■□□□□ 0.78
HMGCS1Q01581 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.9■□□□□ 0.78
HMGCS1Q01581 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGCS1Q01581 AC027702.1-201ENST00000563810 1770 ntBASIC19.9■□□□□ 0.78
HMGCS1Q01581 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGCS1Q01581 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
HMGCS1Q01581 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
HMGCS1Q01581 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGCS1Q01581 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.9■□□□□ 0.78
HMGCS1Q01581 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGCS1Q01581 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGCS1Q01581 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HMGCS1Q01581 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
HMGCS1Q01581 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.9■□□□□ 0.78
HMGCS1Q01581 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HMGCS1Q01581 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGCS1Q01581 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.9■□□□□ 0.78
HMGCS1Q01581 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGCS1Q01581 POU5F1P4-201ENST00000413175 1085 ntBASIC19.9■□□□□ 0.78
HMGCS1Q01581 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGCS1Q01581 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGCS1Q01581 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGCS1Q01581 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.9■□□□□ 0.78
HMGCS1Q01581 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.9■□□□□ 0.78
HMGCS1Q01581 LINC02228-203ENST00000641970 1355 ntBASIC19.9■□□□□ 0.78
HMGCS1Q01581 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGCS1Q01581 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGCS1Q01581 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HMGCS1Q01581 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms