Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP1S1P61966 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP1S1P61966 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP1S1P61966 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
AP1S1P61966 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.92■□□□□ 0.94
AP1S1P61966 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
AP1S1P61966 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
AP1S1P61966 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
AP1S1P61966 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP1S1P61966 FAM21FP-204ENST00000608637 956 ntBASIC20.92■□□□□ 0.94
AP1S1P61966 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
AP1S1P61966 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.92■□□□□ 0.94
AP1S1P61966 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
AP1S1P61966 AC116050.2-201ENST00000612102 1779 ntBASIC20.92■□□□□ 0.94
AP1S1P61966 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP1S1P61966 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
AP1S1P61966 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP1S1P61966 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.92■□□□□ 0.94
AP1S1P61966 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
AP1S1P61966 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
AP1S1P61966 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
AP1S1P61966 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
AP1S1P61966 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
AP1S1P61966 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
AP1S1P61966 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
AP1S1P61966 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
AP1S1P61966 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
AP1S1P61966 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
AP1S1P61966 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
AP1S1P61966 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
AP1S1P61966 AC007322.3-201ENST00000426526 701 ntBASIC20.91■□□□□ 0.94
AP1S1P61966 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.91■□□□□ 0.94
AP1S1P61966 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
AP1S1P61966 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.91■□□□□ 0.94
AP1S1P61966 AC069236.1-201ENST00000604339 616 ntBASIC20.91■□□□□ 0.94
AP1S1P61966 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.91■□□□□ 0.94
AP1S1P61966 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
AP1S1P61966 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP1S1P61966 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.9■□□□□ 0.94
AP1S1P61966 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.9■□□□□ 0.94
AP1S1P61966 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.9■□□□□ 0.94
AP1S1P61966 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP1S1P61966 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP1S1P61966 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.9■□□□□ 0.94
AP1S1P61966 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
AP1S1P61966 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.9■□□□□ 0.94
AP1S1P61966 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP1S1P61966 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.9■□□□□ 0.94
AP1S1P61966 AC008694.1-202ENST00000636953 945 ntBASIC20.9■□□□□ 0.94
AP1S1P61966 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
AP1S1P61966 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
AP1S1P61966 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP1S1P61966 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP1S1P61966 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
AP1S1P61966 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
AP1S1P61966 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP1S1P61966 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
AP1S1P61966 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
AP1S1P61966 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.89■□□□□ 0.93
AP1S1P61966 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.89■□□□□ 0.93
AP1S1P61966 AC133552.2-202ENST00000575694 574 ntBASIC20.89■□□□□ 0.93
AP1S1P61966 AC016405.3-201ENST00000607710 860 ntBASIC20.89■□□□□ 0.93
AP1S1P61966 AL050303.2-201ENST00000619798 666 ntBASIC20.89■□□□□ 0.93
AP1S1P61966 OR10C1-204ENST00000622521 1039 ntBASIC20.89■□□□□ 0.93
AP1S1P61966 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.89■□□□□ 0.93
AP1S1P61966 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.89■□□□□ 0.93
AP1S1P61966 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
AP1S1P61966 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
AP1S1P61966 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
AP1S1P61966 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
AP1S1P61966 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.88■□□□□ 0.93
AP1S1P61966 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.88■□□□□ 0.93
AP1S1P61966 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
AP1S1P61966 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
AP1S1P61966 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
AP1S1P61966 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.88■□□□□ 0.93
AP1S1P61966 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.88■□□□□ 0.93
AP1S1P61966 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
AP1S1P61966 RARRES2P4-201ENST00000514074 484 ntBASIC20.88■□□□□ 0.93
AP1S1P61966 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.88■□□□□ 0.93
AP1S1P61966 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
AP1S1P61966 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
AP1S1P61966 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
AP1S1P61966 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
AP1S1P61966 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
AP1S1P61966 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.88■□□□□ 0.93
AP1S1P61966 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
AP1S1P61966 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.87■□□□□ 0.93
AP1S1P61966 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
AP1S1P61966 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
AP1S1P61966 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
AP1S1P61966 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
AP1S1P61966 AC011484.1-201ENST00000377652 1995 ntBASIC20.87■□□□□ 0.93
AP1S1P61966 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
AP1S1P61966 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
AP1S1P61966 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.87■□□□□ 0.93
AP1S1P61966 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.87■□□□□ 0.93
AP1S1P61966 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
AP1S1P61966 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.87■□□□□ 0.93
AP1S1P61966 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms