Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 Z98882.1-201ENST00000622160 2253 ntBASIC18.23■□□□□ 0.51
UBE2NP61088 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
UBE2NP61088 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBE2NP61088 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.23■□□□□ 0.51
UBE2NP61088 AC090192.1-201ENST00000517740 490 ntBASIC18.23■□□□□ 0.51
UBE2NP61088 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.23■□□□□ 0.51
UBE2NP61088 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.23■□□□□ 0.51
UBE2NP61088 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.23■□□□□ 0.51
UBE2NP61088 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.23■□□□□ 0.51
UBE2NP61088 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.23■□□□□ 0.51
UBE2NP61088 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBE2NP61088 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
UBE2NP61088 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBE2NP61088 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.23■□□□□ 0.51
UBE2NP61088 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
UBE2NP61088 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.23■□□□□ 0.51
UBE2NP61088 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
UBE2NP61088 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBE2NP61088 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBE2NP61088 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
UBE2NP61088 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UBE2NP61088 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBE2NP61088 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBE2NP61088 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.22■□□□□ 0.51
UBE2NP61088 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBE2NP61088 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBE2NP61088 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.22■□□□□ 0.51
UBE2NP61088 CDCA4P2-201ENST00000441182 718 ntBASIC18.22■□□□□ 0.51
UBE2NP61088 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UBE2NP61088 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.22■□□□□ 0.51
UBE2NP61088 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.22■□□□□ 0.51
UBE2NP61088 AC243732.1-201ENST00000612648 864 ntBASIC18.22■□□□□ 0.51
UBE2NP61088 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
UBE2NP61088 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.22■□□□□ 0.51
UBE2NP61088 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.22■□□□□ 0.51
UBE2NP61088 RBM17P2-201ENST00000616397 1405 ntBASIC18.22■□□□□ 0.51
UBE2NP61088 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
UBE2NP61088 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
UBE2NP61088 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
UBE2NP61088 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UBE2NP61088 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBE2NP61088 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UBE2NP61088 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UBE2NP61088 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.21■□□□□ 0.51
UBE2NP61088 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBE2NP61088 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBE2NP61088 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBE2NP61088 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
UBE2NP61088 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.21■□□□□ 0.51
UBE2NP61088 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.21■□□□□ 0.51
UBE2NP61088 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UBE2NP61088 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
UBE2NP61088 AC006970.2-201ENST00000450065 779 ntBASIC18.21■□□□□ 0.51
UBE2NP61088 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.21■□□□□ 0.51
UBE2NP61088 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
UBE2NP61088 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBE2NP61088 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBE2NP61088 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBE2NP61088 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBE2NP61088 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBE2NP61088 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
UBE2NP61088 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2NP61088 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2NP61088 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2NP61088 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
UBE2NP61088 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.2■□□□□ 0.5
UBE2NP61088 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
UBE2NP61088 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2NP61088 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2NP61088 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBE2NP61088 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.19■□□□□ 0.5
UBE2NP61088 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBE2NP61088 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBE2NP61088 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBE2NP61088 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBE2NP61088 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.19■□□□□ 0.5
UBE2NP61088 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.19■□□□□ 0.5
UBE2NP61088 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBE2NP61088 AC005181.1-201ENST00000604782 1256 ntBASIC18.19■□□□□ 0.5
UBE2NP61088 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.19■□□□□ 0.5
UBE2NP61088 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
UBE2NP61088 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBE2NP61088 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.18■□□□□ 0.5
UBE2NP61088 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBE2NP61088 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
UBE2NP61088 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.18■□□□□ 0.5
UBE2NP61088 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UBE2NP61088 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBE2NP61088 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UBE2NP61088 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.18■□□□□ 0.5
UBE2NP61088 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBE2NP61088 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBE2NP61088 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBE2NP61088 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
UBE2NP61088 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBE2NP61088 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.18■□□□□ 0.5
UBE2NP61088 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBE2NP61088 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.18■□□□□ 0.5
UBE2NP61088 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.18■□□□□ 0.5
UBE2NP61088 AC007322.4-201ENST00000509611 723 ntBASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms