Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.53■□□□□ 0.88
CLDN2P57739 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN2P57739 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN2P57739 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CLDN2P57739 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.53■□□□□ 0.88
CLDN2P57739 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN2P57739 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
CLDN2P57739 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.53■□□□□ 0.88
CLDN2P57739 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN2P57739 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.52■□□□□ 0.88
CLDN2P57739 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CLDN2P57739 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.52■□□□□ 0.88
CLDN2P57739 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CLDN2P57739 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN2P57739 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.52■□□□□ 0.88
CLDN2P57739 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CLDN2P57739 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.52■□□□□ 0.88
CLDN2P57739 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.52■□□□□ 0.88
CLDN2P57739 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.52■□□□□ 0.88
CLDN2P57739 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CLDN2P57739 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN2P57739 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN2P57739 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CLDN2P57739 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN2P57739 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN2P57739 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN2P57739 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN2P57739 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN2P57739 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN2P57739 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.51■□□□□ 0.87
CLDN2P57739 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
CLDN2P57739 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.51■□□□□ 0.87
CLDN2P57739 AC008687.6-201ENST00000596318 630 ntBASIC20.51■□□□□ 0.87
CLDN2P57739 AC100791.3-201ENST00000617619 330 ntBASIC20.51■□□□□ 0.87
CLDN2P57739 AC066615.1-201ENST00000640911 628 ntBASIC20.51■□□□□ 0.87
CLDN2P57739 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.51■□□□□ 0.87
CLDN2P57739 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN2P57739 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CLDN2P57739 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN2P57739 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.5■□□□□ 0.87
CLDN2P57739 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN2P57739 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.5■□□□□ 0.87
CLDN2P57739 MCRIP2P1-201ENST00000394346 511 ntBASIC20.5■□□□□ 0.87
CLDN2P57739 KRT18P29-201ENST00000397031 1267 ntBASIC20.5■□□□□ 0.87
CLDN2P57739 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.5■□□□□ 0.87
CLDN2P57739 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.5■□□□□ 0.87
CLDN2P57739 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN2P57739 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN2P57739 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN2P57739 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN2P57739 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CLDN2P57739 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN2P57739 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN2P57739 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN2P57739 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN2P57739 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN2P57739 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN2P57739 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN2P57739 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN2P57739 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN2P57739 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CLDN2P57739 ESRRAP1-201ENST00000400596 1257 ntBASIC20.49■□□□□ 0.87
CLDN2P57739 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.49■□□□□ 0.87
CLDN2P57739 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.49■□□□□ 0.87
CLDN2P57739 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN2P57739 ITM2C-210ENST00000620962 501 ntBASIC20.49■□□□□ 0.87
CLDN2P57739 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN2P57739 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN2P57739 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN2P57739 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN2P57739 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.49■□□□□ 0.87
CLDN2P57739 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLDN2P57739 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLDN2P57739 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLDN2P57739 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLDN2P57739 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.48■□□□□ 0.87
CLDN2P57739 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLDN2P57739 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLDN2P57739 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.48■□□□□ 0.87
CLDN2P57739 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.48■□□□□ 0.87
CLDN2P57739 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CLDN2P57739 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.48■□□□□ 0.87
CLDN2P57739 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.48■□□□□ 0.87
CLDN2P57739 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLDN2P57739 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
CLDN2P57739 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.48■□□□□ 0.87
CLDN2P57739 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLDN2P57739 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLDN2P57739 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLDN2P57739 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CLDN2P57739 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLDN2P57739 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CLDN2P57739 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLDN2P57739 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLDN2P57739 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLDN2P57739 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.47■□□□□ 0.87
CLDN2P57739 EP400NL-214ENST00000641289 2402 ntBASIC20.47■□□□□ 0.87
CLDN2P57739 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLDN2P57739 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
CLDN2P57739 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms