Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AC138907.5-202ENST00000569484 235 ntBASIC19.09■□□□□ 0.65
PER3P56645 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.09■□□□□ 0.65
PER3P56645 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PER3P56645 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PER3P56645 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PER3P56645 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
PER3P56645 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PER3P56645 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PER3P56645 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.09■□□□□ 0.65
PER3P56645 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PER3P56645 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.09■□□□□ 0.65
PER3P56645 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.09■□□□□ 0.65
PER3P56645 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PER3P56645 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PER3P56645 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
PER3P56645 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PER3P56645 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.65
PER3P56645 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PER3P56645 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PER3P56645 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PER3P56645 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.08■□□□□ 0.64
PER3P56645 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PER3P56645 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PER3P56645 MIPEPP3-201ENST00000412105 444 ntBASIC19.08■□□□□ 0.64
PER3P56645 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PER3P56645 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.08■□□□□ 0.64
PER3P56645 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.08■□□□□ 0.64
PER3P56645 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PER3P56645 AC069236.1-201ENST00000604339 616 ntBASIC19.08■□□□□ 0.64
PER3P56645 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.08■□□□□ 0.64
PER3P56645 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PER3P56645 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PER3P56645 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PER3P56645 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PER3P56645 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PER3P56645 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PER3P56645 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.07■□□□□ 0.64
PER3P56645 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PER3P56645 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PER3P56645 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
PER3P56645 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PER3P56645 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PER3P56645 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.07■□□□□ 0.64
PER3P56645 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PER3P56645 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.07■□□□□ 0.64
PER3P56645 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
PER3P56645 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.07■□□□□ 0.64
PER3P56645 OR10C1-204ENST00000622521 1039 ntBASIC19.07■□□□□ 0.64
PER3P56645 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PER3P56645 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PER3P56645 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PER3P56645 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PER3P56645 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.07■□□□□ 0.64
PER3P56645 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PER3P56645 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PER3P56645 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PER3P56645 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PER3P56645 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.06■□□□□ 0.64
PER3P56645 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PER3P56645 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PER3P56645 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PER3P56645 PRORSD1P-201ENST00000295112 541 ntBASIC19.06■□□□□ 0.64
PER3P56645 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.06■□□□□ 0.64
PER3P56645 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PER3P56645 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.06■□□□□ 0.64
PER3P56645 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.06■□□□□ 0.64
PER3P56645 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.06■□□□□ 0.64
PER3P56645 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PER3P56645 AC092118.2-201ENST00000613495 667 ntBASIC19.06■□□□□ 0.64
PER3P56645 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.06■□□□□ 0.64
PER3P56645 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PER3P56645 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PER3P56645 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
PER3P56645 AC242852.2-201ENST00000615738 1807 ntBASIC19.06■□□□□ 0.64
PER3P56645 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PER3P56645 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PER3P56645 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PER3P56645 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PER3P56645 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PER3P56645 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PER3P56645 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PER3P56645 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.06■□□□□ 0.64
PER3P56645 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PER3P56645 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.05■□□□□ 0.64
PER3P56645 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
PER3P56645 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PER3P56645 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PER3P56645 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PER3P56645 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
PER3P56645 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PER3P56645 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PER3P56645 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.05■□□□□ 0.64
PER3P56645 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.05■□□□□ 0.64
PER3P56645 CYP2T1P-201ENST00000432607 1285 ntBASIC19.05■□□□□ 0.64
PER3P56645 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.05■□□□□ 0.64
PER3P56645 TERF1P5-201ENST00000477545 1207 ntBASIC19.05■□□□□ 0.64
PER3P56645 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.05■□□□□ 0.64
PER3P56645 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.05■□□□□ 0.64
PER3P56645 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.05■□□□□ 0.64
PER3P56645 SLC7A5P1-201ENST00000568957 537 ntBASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms