Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.28■□□□□ 0.68
PSMD4P55036 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.27■□□□□ 0.68
PSMD4P55036 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.27■□□□□ 0.68
PSMD4P55036 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.27■□□□□ 0.68
PSMD4P55036 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PSMD4P55036 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PSMD4P55036 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.27■□□□□ 0.68
PSMD4P55036 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.27■□□□□ 0.68
PSMD4P55036 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
PSMD4P55036 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.27■□□□□ 0.68
PSMD4P55036 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.27■□□□□ 0.68
PSMD4P55036 SLC7A5P1-201ENST00000568957 537 ntBASIC19.27■□□□□ 0.68
PSMD4P55036 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PSMD4P55036 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PSMD4P55036 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.27■□□□□ 0.68
PSMD4P55036 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
PSMD4P55036 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.27■□□□□ 0.67
PSMD4P55036 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PSMD4P55036 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PSMD4P55036 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PSMD4P55036 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
PSMD4P55036 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.26■□□□□ 0.67
PSMD4P55036 AC245052.3-201ENST00000450182 901 ntBASIC19.26■□□□□ 0.67
PSMD4P55036 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.26■□□□□ 0.67
PSMD4P55036 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.26■□□□□ 0.67
PSMD4P55036 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.26■□□□□ 0.67
PSMD4P55036 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.26■□□□□ 0.67
PSMD4P55036 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.26■□□□□ 0.67
PSMD4P55036 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PSMD4P55036 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PSMD4P55036 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PSMD4P55036 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PSMD4P55036 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PSMD4P55036 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PSMD4P55036 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PSMD4P55036 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PSMD4P55036 AF106564.1-201ENST00000607058 2553 ntBASIC19.25■□□□□ 0.67
PSMD4P55036 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PSMD4P55036 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PSMD4P55036 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
PSMD4P55036 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
PSMD4P55036 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.25■□□□□ 0.67
PSMD4P55036 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PSMD4P55036 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.25■□□□□ 0.67
PSMD4P55036 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.25■□□□□ 0.67
PSMD4P55036 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PSMD4P55036 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PSMD4P55036 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.25■□□□□ 0.67
PSMD4P55036 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PSMD4P55036 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.25■□□□□ 0.67
PSMD4P55036 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PSMD4P55036 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PSMD4P55036 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PSMD4P55036 AL162430.1-201ENST00000480705 870 ntBASIC19.24■□□□□ 0.67
PSMD4P55036 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.24■□□□□ 0.67
PSMD4P55036 AC137761.2-201ENST00000561729 223 ntBASIC19.24■□□□□ 0.67
PSMD4P55036 AC145350.3-201ENST00000569033 163 ntBASIC19.24■□□□□ 0.67
PSMD4P55036 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PSMD4P55036 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PSMD4P55036 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.24■□□□□ 0.67
PSMD4P55036 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PSMD4P55036 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PSMD4P55036 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PSMD4P55036 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
PSMD4P55036 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PSMD4P55036 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PSMD4P55036 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PSMD4P55036 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PSMD4P55036 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.23■□□□□ 0.67
PSMD4P55036 AC016769.1-201ENST00000409132 1010 ntBASIC19.23■□□□□ 0.67
PSMD4P55036 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
PSMD4P55036 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PSMD4P55036 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
PSMD4P55036 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.23■□□□□ 0.67
PSMD4P55036 SLC7A5P2-201ENST00000553010 536 ntBASIC19.23■□□□□ 0.67
PSMD4P55036 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PSMD4P55036 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.23■□□□□ 0.67
PSMD4P55036 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PSMD4P55036 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PSMD4P55036 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
PSMD4P55036 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PSMD4P55036 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PSMD4P55036 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PSMD4P55036 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PSMD4P55036 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.22■□□□□ 0.67
PSMD4P55036 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.22■□□□□ 0.67
PSMD4P55036 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PSMD4P55036 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
PSMD4P55036 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PSMD4P55036 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PSMD4P55036 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.22■□□□□ 0.67
PSMD4P55036 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PSMD4P55036 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PSMD4P55036 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.22■□□□□ 0.67
PSMD4P55036 KRT18P61-201ENST00000585825 1298 ntBASIC19.22■□□□□ 0.67
PSMD4P55036 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PSMD4P55036 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PSMD4P55036 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PSMD4P55036 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.22■□□□□ 0.67
PSMD4P55036 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms