Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
SMSP52788 SMUG1P1-201ENST00000590640 811 ntBASIC19.36■□□□□ 0.69
SMSP52788 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMSP52788 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMSP52788 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMSP52788 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMSP52788 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMSP52788 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMSP52788 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMSP52788 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMSP52788 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMSP52788 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SMSP52788 LINC01521-201ENST00000504184 1943 ntBASIC19.35■□□□□ 0.69
SMSP52788 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMSP52788 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMSP52788 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.35■□□□□ 0.69
SMSP52788 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SMSP52788 ABHD17AP1-201ENST00000358206 933 ntBASIC19.35■□□□□ 0.69
SMSP52788 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMSP52788 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.35■□□□□ 0.69
SMSP52788 TMEM191A-211ENST00000637163 1067 ntBASIC19.35■□□□□ 0.69
SMSP52788 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMSP52788 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMSP52788 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.35■□□□□ 0.69
SMSP52788 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMSP52788 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SMSP52788 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SMSP52788 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SMSP52788 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMSP52788 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SMSP52788 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SMSP52788 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMSP52788 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
SMSP52788 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMSP52788 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMSP52788 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMSP52788 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.34■□□□□ 0.69
SMSP52788 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SMSP52788 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.34■□□□□ 0.69
SMSP52788 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SMSP52788 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.34■□□□□ 0.69
SMSP52788 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMSP52788 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMSP52788 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SMSP52788 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SMSP52788 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.33■□□□□ 0.69
SMSP52788 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SMSP52788 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMSP52788 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.33■□□□□ 0.68
SMSP52788 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.33■□□□□ 0.68
SMSP52788 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.33■□□□□ 0.68
SMSP52788 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.33■□□□□ 0.68
SMSP52788 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SMSP52788 AL157384.1-201ENST00000445995 2473 ntBASIC19.33■□□□□ 0.68
SMSP52788 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SMSP52788 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SMSP52788 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.33■□□□□ 0.68
SMSP52788 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SMSP52788 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
SMSP52788 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.32■□□□□ 0.68
SMSP52788 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SMSP52788 RNF165-205ENST00000588679 2904 ntBASIC19.32■□□□□ 0.68
SMSP52788 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMSP52788 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.32■□□□□ 0.68
SMSP52788 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.32■□□□□ 0.68
SMSP52788 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMSP52788 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.32■□□□□ 0.68
SMSP52788 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
SMSP52788 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.32■□□□□ 0.68
SMSP52788 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMSP52788 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
SMSP52788 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMSP52788 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMSP52788 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMSP52788 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMSP52788 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMSP52788 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.31■□□□□ 0.68
SMSP52788 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.31■□□□□ 0.68
SMSP52788 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMSP52788 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.31■□□□□ 0.68
SMSP52788 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMSP52788 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMSP52788 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMSP52788 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMSP52788 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMSP52788 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMSP52788 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMSP52788 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SMSP52788 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMSP52788 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.3■□□□□ 0.68
SMSP52788 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.3■□□□□ 0.68
SMSP52788 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SMSP52788 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMSP52788 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SMSP52788 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SMSP52788 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMSP52788 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMSP52788 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SMSP52788 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SMSP52788 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms