Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.57■■□□□ 1.2
CDR1P51861 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDR1P51861 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC22.57■■□□□ 1.2
CDR1P51861 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC22.57■■□□□ 1.2
CDR1P51861 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC22.57■■□□□ 1.2
CDR1P51861 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.57■■□□□ 1.2
CDR1P51861 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.57■■□□□ 1.2
CDR1P51861 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDR1P51861 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDR1P51861 FAM99A-202ENST00000538190 1989 ntBASIC22.57■■□□□ 1.2
CDR1P51861 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDR1P51861 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDR1P51861 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDR1P51861 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC22.56■■□□□ 1.2
CDR1P51861 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC22.56■■□□□ 1.2
CDR1P51861 HLA-L-209ENST00000420110 1011 ntBASIC22.56■■□□□ 1.2
CDR1P51861 CROCCP5-201ENST00000436658 830 ntBASIC22.56■■□□□ 1.2
CDR1P51861 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
CDR1P51861 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.56■■□□□ 1.2
CDR1P51861 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDR1P51861 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.56■■□□□ 1.2
CDR1P51861 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDR1P51861 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDR1P51861 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
CDR1P51861 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDR1P51861 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC22.55■■□□□ 1.2
CDR1P51861 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC22.55■■□□□ 1.2
CDR1P51861 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC22.55■■□□□ 1.2
CDR1P51861 AL034346.1-201ENST00000568244 1277 ntBASIC22.55■■□□□ 1.2
CDR1P51861 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDR1P51861 WT1-AS_3.1-201ENST00000613262 234 ntBASIC22.55■■□□□ 1.2
CDR1P51861 MAZ-216ENST00000616501 991 ntTSL 5 BASIC22.55■■□□□ 1.2
CDR1P51861 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDR1P51861 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDR1P51861 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CDR1P51861 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.55■■□□□ 1.2
CDR1P51861 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDR1P51861 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC22.55■■□□□ 1.2
CDR1P51861 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC22.54■■□□□ 1.2
CDR1P51861 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDR1P51861 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
CDR1P51861 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.54■■□□□ 1.2
CDR1P51861 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
CDR1P51861 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CDR1P51861 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC22.54■■□□□ 1.2
CDR1P51861 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC22.54■■□□□ 1.2
CDR1P51861 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDR1P51861 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CDR1P51861 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDR1P51861 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC22.54■■□□□ 1.2
CDR1P51861 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
CDR1P51861 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC22.54■■□□□ 1.2
CDR1P51861 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CDR1P51861 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CDR1P51861 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
CDR1P51861 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
CDR1P51861 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDR1P51861 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDR1P51861 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.53■■□□□ 1.2
CDR1P51861 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.53■■□□□ 1.2
CDR1P51861 BRI3-207ENST00000539286 699 ntTSL 2 BASIC22.53■■□□□ 1.2
CDR1P51861 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDR1P51861 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CDR1P51861 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
CDR1P51861 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC22.53■■□□□ 1.2
CDR1P51861 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC22.52■■□□□ 1.2
CDR1P51861 PALM-208ENST00000592155 2272 ntTSL 4 BASIC22.52■■□□□ 1.2
CDR1P51861 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CDR1P51861 ID1-201ENST00000376105 1233 ntBASIC22.52■■□□□ 1.2
CDR1P51861 MAP2K4P1-201ENST00000438453 1195 ntBASIC22.52■■□□□ 1.2
CDR1P51861 AC026185.1-201ENST00000445748 174 ntBASIC22.52■■□□□ 1.2
CDR1P51861 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC22.52■■□□□ 1.2
CDR1P51861 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDR1P51861 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CDR1P51861 RNF165-205ENST00000588679 2904 ntBASIC22.52■■□□□ 1.2
CDR1P51861 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC22.52■■□□□ 1.2
CDR1P51861 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
CDR1P51861 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDR1P51861 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.52■■□□□ 1.2
CDR1P51861 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDR1P51861 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDR1P51861 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDR1P51861 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDR1P51861 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDR1P51861 MIR663A-201ENST00000385250 93 ntBASIC22.51■■□□□ 1.19
CDR1P51861 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDR1P51861 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC22.51■■□□□ 1.19
CDR1P51861 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC22.51■■□□□ 1.19
CDR1P51861 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDR1P51861 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
CDR1P51861 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
CDR1P51861 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDR1P51861 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDR1P51861 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC22.5■■□□□ 1.19
CDR1P51861 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
CDR1P51861 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDR1P51861 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.5■■□□□ 1.19
CDR1P51861 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDR1P51861 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDR1P51861 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms