Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RAB28P51157 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.07■□□□□ 0.8
RAB28P51157 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB28P51157 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB28P51157 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAB28P51157 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB28P51157 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
RAB28P51157 PKD1P6-201ENST00000343738 4769 ntBASIC20.06■□□□□ 0.8
RAB28P51157 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB28P51157 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB28P51157 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAB28P51157 CYP2T1P-201ENST00000432607 1285 ntBASIC20.06■□□□□ 0.8
RAB28P51157 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAB28P51157 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAB28P51157 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB28P51157 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB28P51157 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.06■□□□□ 0.8
RAB28P51157 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.06■□□□□ 0.8
RAB28P51157 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB28P51157 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAB28P51157 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RAB28P51157 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB28P51157 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.05■□□□□ 0.8
RAB28P51157 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
RAB28P51157 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB28P51157 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.05■□□□□ 0.8
RAB28P51157 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB28P51157 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.05■□□□□ 0.8
RAB28P51157 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
RAB28P51157 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RAB28P51157 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB28P51157 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RAB28P51157 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB28P51157 AC116050.2-201ENST00000612102 1779 ntBASIC20.05■□□□□ 0.8
RAB28P51157 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.04■□□□□ 0.8
RAB28P51157 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB28P51157 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAB28P51157 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.04■□□□□ 0.8
RAB28P51157 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.04■□□□□ 0.8
RAB28P51157 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.04■□□□□ 0.8
RAB28P51157 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAB28P51157 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAB28P51157 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RAB28P51157 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB28P51157 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
RAB28P51157 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB28P51157 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.04■□□□□ 0.8
RAB28P51157 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB28P51157 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB28P51157 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.04■□□□□ 0.8
RAB28P51157 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB28P51157 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RAB28P51157 AF106564.1-201ENST00000607058 2553 ntBASIC20.03■□□□□ 0.8
RAB28P51157 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RAB28P51157 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.03■□□□□ 0.8
RAB28P51157 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB28P51157 AC007322.3-201ENST00000426526 701 ntBASIC20.03■□□□□ 0.8
RAB28P51157 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.03■□□□□ 0.8
RAB28P51157 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.03■□□□□ 0.8
RAB28P51157 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.03■□□□□ 0.8
RAB28P51157 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.03■□□□□ 0.8
RAB28P51157 AC069236.1-201ENST00000604339 616 ntBASIC20.03■□□□□ 0.8
RAB28P51157 FAM21FP-204ENST00000608637 956 ntBASIC20.03■□□□□ 0.8
RAB28P51157 AL050303.2-201ENST00000619798 666 ntBASIC20.03■□□□□ 0.8
RAB28P51157 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.03■□□□□ 0.8
RAB28P51157 AC008694.1-202ENST00000636953 945 ntBASIC20.03■□□□□ 0.8
RAB28P51157 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB28P51157 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RAB28P51157 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB28P51157 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB28P51157 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RAB28P51157 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
RAB28P51157 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB28P51157 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB28P51157 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB28P51157 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB28P51157 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB28P51157 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
RAB28P51157 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB28P51157 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.02■□□□□ 0.8
RAB28P51157 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.02■□□□□ 0.8
RAB28P51157 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.02■□□□□ 0.8
RAB28P51157 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RAB28P51157 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.02■□□□□ 0.8
RAB28P51157 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.02■□□□□ 0.8
RAB28P51157 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB28P51157 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
RAB28P51157 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB28P51157 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.02■□□□□ 0.8
RAB28P51157 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
RAB28P51157 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.01■□□□□ 0.79
RAB28P51157 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RAB28P51157 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RAB28P51157 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
RAB28P51157 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB28P51157 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RAB28P51157 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.01■□□□□ 0.79
RAB28P51157 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB28P51157 RARRES2P4-201ENST00000514074 484 ntBASIC20.01■□□□□ 0.79
RAB28P51157 AC133552.2-202ENST00000575694 574 ntBASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms