Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB5CP51148 TNXA-203ENST00000507684 2038 ntBASIC16.68■□□□□ 0.26
RAB5CP51148 AC116562.4-201ENST00000641316 2276 ntBASIC16.68■□□□□ 0.26
RAB5CP51148 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB5CP51148 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB5CP51148 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RAB5CP51148 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB5CP51148 AC007225.1-201ENST00000566331 1836 ntBASIC16.68■□□□□ 0.26
RAB5CP51148 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC16.68■□□□□ 0.26
RAB5CP51148 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB5CP51148 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB5CP51148 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB5CP51148 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB5CP51148 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB5CP51148 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB5CP51148 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
RAB5CP51148 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC16.67■□□□□ 0.26
RAB5CP51148 EI24-211ENST00000534546 1544 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB5CP51148 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB5CP51148 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB5CP51148 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB5CP51148 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB5CP51148 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB5CP51148 ABHD17AP4-201ENST00000411545 909 ntBASIC16.67■□□□□ 0.26
RAB5CP51148 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB5CP51148 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB5CP51148 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RAB5CP51148 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB5CP51148 AC112907.3-201ENST00000577781 2400 ntBASIC16.66■□□□□ 0.26
RAB5CP51148 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAB5CP51148 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB5CP51148 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB5CP51148 AC120024.1-201ENST00000562672 995 ntBASIC16.66■□□□□ 0.26
RAB5CP51148 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB5CP51148 AC019171.1-201ENST00000601251 1056 ntBASIC16.66■□□□□ 0.26
RAB5CP51148 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
RAB5CP51148 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB5CP51148 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB5CP51148 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB5CP51148 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB5CP51148 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
RAB5CP51148 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RAB5CP51148 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB5CP51148 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAB5CP51148 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RAB5CP51148 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.65■□□□□ 0.26
RAB5CP51148 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB5CP51148 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB5CP51148 AC099778.1-201ENST00000568593 1911 ntBASIC16.65■□□□□ 0.26
RAB5CP51148 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RAB5CP51148 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAB5CP51148 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC16.65■□□□□ 0.26
RAB5CP51148 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB5CP51148 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB5CP51148 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB5CP51148 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB5CP51148 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RAB5CP51148 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAB5CP51148 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC16.65■□□□□ 0.26
RAB5CP51148 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB5CP51148 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB5CP51148 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAB5CP51148 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAB5CP51148 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
RAB5CP51148 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.64■□□□□ 0.25
RAB5CP51148 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAB5CP51148 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB5CP51148 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.64■□□□□ 0.25
RAB5CP51148 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB5CP51148 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB5CP51148 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB5CP51148 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB5CP51148 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.64■□□□□ 0.25
RAB5CP51148 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAB5CP51148 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.64■□□□□ 0.25
RAB5CP51148 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAB5CP51148 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RAB5CP51148 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC16.64■□□□□ 0.25
RAB5CP51148 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB5CP51148 AP000974.1-201ENST00000623909 2387 ntBASIC16.64■□□□□ 0.25
RAB5CP51148 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB5CP51148 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
RAB5CP51148 AL512408.1-201ENST00000569378 2000 ntBASIC16.63■□□□□ 0.25
RAB5CP51148 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB5CP51148 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
RAB5CP51148 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB5CP51148 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB5CP51148 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.63■□□□□ 0.25
RAB5CP51148 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB5CP51148 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB5CP51148 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB5CP51148 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB5CP51148 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB5CP51148 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB5CP51148 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
RAB5CP51148 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB5CP51148 AC121338.2-201ENST00000622535 1744 ntBASIC16.63■□□□□ 0.25
RAB5CP51148 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB5CP51148 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB5CP51148 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms