Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SRP9P49458 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SRP9P49458 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRP9P49458 AC087289.5-201ENST00000586076 3175 ntBASIC18.31■□□□□ 0.52
SRP9P49458 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
SRP9P49458 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRP9P49458 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SRP9P49458 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRP9P49458 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
SRP9P49458 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRP9P49458 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.31■□□□□ 0.52
SRP9P49458 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRP9P49458 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SRP9P49458 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SRP9P49458 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.31■□□□□ 0.52
SRP9P49458 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.31■□□□□ 0.52
SRP9P49458 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.31■□□□□ 0.52
SRP9P49458 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRP9P49458 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SRP9P49458 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRP9P49458 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.3■□□□□ 0.52
SRP9P49458 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.3■□□□□ 0.52
SRP9P49458 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRP9P49458 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRP9P49458 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRP9P49458 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.3■□□□□ 0.52
SRP9P49458 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.3■□□□□ 0.52
SRP9P49458 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.3■□□□□ 0.52
SRP9P49458 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.3■□□□□ 0.52
SRP9P49458 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRP9P49458 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRP9P49458 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRP9P49458 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRP9P49458 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.3■□□□□ 0.52
SRP9P49458 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.3■□□□□ 0.52
SRP9P49458 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRP9P49458 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRP9P49458 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.3■□□□□ 0.52
SRP9P49458 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.3■□□□□ 0.52
SRP9P49458 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.3■□□□□ 0.52
SRP9P49458 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRP9P49458 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRP9P49458 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SRP9P49458 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SRP9P49458 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.29■□□□□ 0.52
SRP9P49458 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.29■□□□□ 0.52
SRP9P49458 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRP9P49458 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRP9P49458 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRP9P49458 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.29■□□□□ 0.52
SRP9P49458 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.29■□□□□ 0.52
SRP9P49458 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRP9P49458 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.29■□□□□ 0.52
SRP9P49458 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SRP9P49458 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SRP9P49458 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRP9P49458 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.29■□□□□ 0.52
SRP9P49458 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SRP9P49458 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SRP9P49458 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRP9P49458 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRP9P49458 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRP9P49458 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRP9P49458 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.29■□□□□ 0.52
SRP9P49458 BX005040.4-201ENST00000637145 1518 ntBASIC18.28■□□□□ 0.52
SRP9P49458 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SRP9P49458 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SRP9P49458 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.28■□□□□ 0.52
SRP9P49458 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SRP9P49458 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.28■□□□□ 0.52
SRP9P49458 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SRP9P49458 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SRP9P49458 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SRP9P49458 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SRP9P49458 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SRP9P49458 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.28■□□□□ 0.52
SRP9P49458 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SRP9P49458 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SRP9P49458 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SRP9P49458 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SRP9P49458 AP004607.7-201ENST00000527152 1677 ntBASIC18.28■□□□□ 0.52
SRP9P49458 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.28■□□□□ 0.52
SRP9P49458 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SRP9P49458 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SRP9P49458 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.27■□□□□ 0.52
SRP9P49458 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SRP9P49458 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SRP9P49458 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SRP9P49458 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SRP9P49458 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SRP9P49458 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SRP9P49458 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SRP9P49458 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.27■□□□□ 0.52
SRP9P49458 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.27■□□□□ 0.52
SRP9P49458 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
SRP9P49458 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SRP9P49458 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SRP9P49458 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.27■□□□□ 0.52
SRP9P49458 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.27■□□□□ 0.52
SRP9P49458 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms