Protein–RNA interactions for Protein: P47821

SSN8, RNA polymerase II holoenzyme cyclin-like subunit, yeastyeast

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN8P47821 GIC1YHR061C 945 nt2.71□□□□□ -1.98
SSN8P47821 YAL031W-AYAL031W-A 309 nt2.71□□□□□ -1.98
SSN8P47821 RPS16AYMR143W 432 nt2.71□□□□□ -1.98
SSN8P47821 SWS2YNL081C 432 nt2.71□□□□□ -1.98
SSN8P47821 MRPL40YPL173W 894 nt2.71□□□□□ -1.98
SSN8P47821 TPK2YPL203W 1143 nt2.71□□□□□ -1.98
SSN8P47821 SHS1YDL225W 1656 nt2.71□□□□□ -1.98
SSN8P47821 MED1YPR070W 1701 nt2.71□□□□□ -1.98
SSN8P47821 NOP4YPL043W 2058 nt2.7□□□□□ -1.98
SSN8P47821 IKI3YLR384C 4050 nt2.7□□□□□ -1.98
SSN8P47821 YNL193WYNL193W 1677 nt2.7□□□□□ -1.98
SSN8P47821 MRH1YDR033W 963 nt2.7□□□□□ -1.98
SSN8P47821 FIN1YDR130C 876 nt2.7□□□□□ -1.98
SSN8P47821 GCD6YDR211W 2139 nt2.7□□□□□ -1.98
SSN8P47821 YGR053CYGR053C 852 nt2.7□□□□□ -1.98
SSN8P47821 SCEIQ0160 708 nt2.7□□□□□ -1.98
SSN8P47821 YKL023C-AYKL023C-A 228 nt2.7□□□□□ -1.98
SSN8P47821 ATP18YML081C-A 180 nt2.7□□□□□ -1.98
SSN8P47821 UBX4YMR067C 1251 nt2.7□□□□□ -1.98
SSN8P47821 PIS1YPR113W 663 nt2.7□□□□□ -1.98
SSN8P47821 DBF20YPR111W 1695 nt2.69□□□□□ -1.98
SSN8P47821 JJJ1YNL227C 1773 nt2.69□□□□□ -1.98
SSN8P47821 ECM29YHL030W 5607 nt2.69□□□□□ -1.98
SSN8P47821 HYP2YEL034W 474 nt2.69□□□□□ -1.98
SSN8P47821 YGR017WYGR017W 894 nt2.69□□□□□ -1.98
SSN8P47821 YGR228WYGR228W 345 nt2.69□□□□□ -1.98
SSN8P47821 MTM1YGR257C 1101 nt2.69□□□□□ -1.98
SSN8P47821 BET4YJL031C 984 nt2.69□□□□□ -1.98
SSN8P47821 APQ13YJL075C 417 nt2.69□□□□□ -1.98
SSN8P47821 LSM8YJR022W 330 nt2.69□□□□□ -1.98
SSN8P47821 MRPL38YKL170W 417 nt2.69□□□□□ -1.98
SSN8P47821 YLR224WYLR224W 1110 nt2.69□□□□□ -1.98
SSN8P47821 PDP3YLR455W 915 nt2.69□□□□□ -1.98
SSN8P47821 ATG3YNR007C 933 nt2.69□□□□□ -1.98
SSN8P47821 YPL142CYPL142C 318 nt2.69□□□□□ -1.98
SSN8P47821 YBR062CYBR062C 543 nt2.69□□□□□ -1.98
SSN8P47821 SWD3YBR175W 948 nt2.69□□□□□ -1.98
SSN8P47821 EPL1YFL024C 2499 nt2.69□□□□□ -1.98
SSN8P47821 MET6YER091C 2304 nt2.69□□□□□ -1.98
SSN8P47821 TMA64YDR117C 1698 nt2.69□□□□□ -1.98
SSN8P47821 RIX1YHR197W 2292 nt2.68□□□□□ -1.98
SSN8P47821 snR84snR84 550 nt2.68□□□□□ -1.98
SSN8P47821 YGR018CYGR018C 330 nt2.68□□□□□ -1.98
SSN8P47821 PRS3YHL011C 963 nt2.68□□□□□ -1.98
SSN8P47821 SYS1YJL004C 612 nt2.68□□□□□ -1.98
SSN8P47821 VPS63YLR261C 327 nt2.68□□□□□ -1.98
SSN8P47821 YLR456WYLR456W 615 nt2.68□□□□□ -1.98
SSN8P47821 RPN3YER021W 1572 nt2.68□□□□□ -1.98
SSN8P47821 PSK1YAL017W 4071 nt2.68□□□□□ -1.98
SSN8P47821 HOP1YIL072W 1818 nt2.68□□□□□ -1.98
SSN8P47821 MAK5YBR142W 2322 nt2.67□□□□□ -1.98
SSN8P47821 NTO1YPR031W 2247 nt2.67□□□□□ -1.98
SSN8P47821 PEA2YER149C 1263 nt2.67□□□□□ -1.98
SSN8P47821 MPO1YGL010W 525 nt2.67□□□□□ -1.98
SSN8P47821 YJR141WYJR141W 1044 nt2.67□□□□□ -1.98
SSN8P47821 YNL203CYNL203C 612 nt2.67□□□□□ -1.98
SSN8P47821 CEP3YMR168C 1827 nt2.67□□□□□ -1.98
SSN8P47821 PFF1YBR074W 2931 nt2.67□□□□□ -1.98
SSN8P47821 YDR034C-DYDR034C-D 5313 nt2.67□□□□□ -1.98
SSN8P47821 VHR2YER064C 1518 nt2.67□□□□□ -1.98
SSN8P47821 GAL80YML051W 1308 nt2.67□□□□□ -1.98
SSN8P47821 PMR1YGL167C 2853 nt2.67□□□□□ -1.98
SSN8P47821 STE6YKL209C 3873 nt2.67□□□□□ -1.98
SSN8P47821 YKL100CYKL100C 1764 nt2.66□□□□□ -1.98
SSN8P47821 VPS30YPL120W 1674 nt2.66□□□□□ -1.98
SSN8P47821 URB2YJR041C 3525 nt2.66□□□□□ -1.98
SSN8P47821 YKR051WYKR051W 1257 nt2.66□□□□□ -1.98
SSN8P47821 YNL150WYNL150W 408 nt2.66□□□□□ -1.98
SSN8P47821 YPR014CYPR014C 330 nt2.66□□□□□ -1.98
SSN8P47821 AFR1YDR085C 1863 nt2.66□□□□□ -1.98
SSN8P47821 PCK1YKR097W 1650 nt2.66□□□□□ -1.98
SSN8P47821 SKO1YNL167C 1944 nt2.66□□□□□ -1.98
SSN8P47821 YLR001CYLR001C 2589 nt2.65□□□□□ -1.98
SSN8P47821 PDS5YMR076C 3834 nt2.65□□□□□ -1.98
SSN8P47821 DSF2YBR007C 2211 nt2.65□□□□□ -1.98
SSN8P47821 RPA190YOR341W 4995 nt2.65□□□□□ -1.98
SSN8P47821 YGR290WYGR290W 444 nt2.65□□□□□ -1.99
SSN8P47821 COX23YHR116W 456 nt2.65□□□□□ -1.99
SSN8P47821 CSE4YKL049C 690 nt2.65□□□□□ -1.99
SSN8P47821 COX8YLR395C 237 nt2.65□□□□□ -1.99
SSN8P47821 GAL7YBR018C 1101 nt2.65□□□□□ -1.99
SSN8P47821 YOR331CYOR331C 558 nt2.65□□□□□ -1.99
SSN8P47821 ACM1YPL267W 630 nt2.65□□□□□ -1.99
SSN8P47821 TIM12YBR091C 330 nt2.65□□□□□ -1.99
SSN8P47821 AVT2YEL064C 1443 nt2.65□□□□□ -1.99
SSN8P47821 SCY1YGL083W 2415 nt2.64□□□□□ -1.99
SSN8P47821 YCK2YNL154C 1641 nt2.64□□□□□ -1.99
SSN8P47821 SHE4YOR035C 2370 nt2.64□□□□□ -1.99
SSN8P47821 DSE4YNR067C 3354 nt2.64□□□□□ -1.99
SSN8P47821 tQ(UUG)BtQ(UUG)B 72 nt2.64□□□□□ -1.99
SSN8P47821 YJL086CYJL086C 369 nt2.64□□□□□ -1.99
SSN8P47821 ILM1YJR118C 612 nt2.64□□□□□ -1.99
SSN8P47821 BPT1YLL015W 4680 nt2.64□□□□□ -1.99
SSN8P47821 YLR257WYLR257W 966 nt2.64□□□□□ -1.99
SSN8P47821 JID1YPR061C 906 nt2.64□□□□□ -1.99
SSN8P47821 snR42snR42 351 nt2.64□□□□□ -1.99
SSN8P47821 BNR1YIL159W 4128 nt2.64□□□□□ -1.99
SSN8P47821 UTP14YML093W 2700 nt2.63□□□□□ -1.99
SSN8P47821 YKL075CYKL075C 1353 nt2.63□□□□□ -1.99
SSN8P47821 KHA1YJL094C 2622 nt2.63□□□□□ -1.99
Retrieved 100 of 7,029 protein–RNA pairs in 20.9 ms