Protein–RNA interactions for Protein: P43004

SLC1A2, Excitatory amino acid transporter 2, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A2P43004 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A2P43004 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.65■□□□□ 0.9
SLC1A2P43004 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A2P43004 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
SLC1A2P43004 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.65■□□□□ 0.9
SLC1A2P43004 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A2P43004 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A2P43004 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.65■□□□□ 0.9
SLC1A2P43004 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A2P43004 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.65■□□□□ 0.9
SLC1A2P43004 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.65■□□□□ 0.9
SLC1A2P43004 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.65■□□□□ 0.9
SLC1A2P43004 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A2P43004 DUX4L2-201ENST00000561772 1275 ntBASIC20.65■□□□□ 0.9
SLC1A2P43004 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.65■□□□□ 0.9
SLC1A2P43004 DUX4L6-201ENST00000626483 1275 ntBASIC20.65■□□□□ 0.9
SLC1A2P43004 DUX4L1-201ENST00000627662 1275 ntBASIC20.65■□□□□ 0.9
SLC1A2P43004 DUX4L8-201ENST00000629013 1275 ntBASIC20.65■□□□□ 0.9
SLC1A2P43004 DUX4L3-201ENST00000630187 1275 ntBASIC20.65■□□□□ 0.9
SLC1A2P43004 DUX4L7-201ENST00000630678 1275 ntBASIC20.65■□□□□ 0.9
SLC1A2P43004 DUX4L5-201ENST00000630834 1275 ntBASIC20.65■□□□□ 0.9
SLC1A2P43004 RARRES2P11-201ENST00000635158 484 ntBASIC20.65■□□□□ 0.9
SLC1A2P43004 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SLC1A2P43004 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A2P43004 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A2P43004 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.64■□□□□ 0.9
SLC1A2P43004 AC007225.1-201ENST00000566331 1836 ntBASIC20.64■□□□□ 0.9
SLC1A2P43004 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SLC1A2P43004 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.64■□□□□ 0.9
SLC1A2P43004 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC1A2P43004 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLC1A2P43004 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
SLC1A2P43004 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC1A2P43004 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC1A2P43004 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC1A2P43004 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
SLC1A2P43004 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.64■□□□□ 0.89
SLC1A2P43004 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC1A2P43004 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SLC1A2P43004 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC1A2P43004 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.64■□□□□ 0.89
SLC1A2P43004 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.64■□□□□ 0.89
SLC1A2P43004 AP001160.3-201ENST00000601484 763 ntBASIC20.64■□□□□ 0.89
SLC1A2P43004 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLC1A2P43004 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
SLC1A2P43004 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC1A2P43004 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.63■□□□□ 0.89
SLC1A2P43004 AC004854.2-201ENST00000608450 1441 ntBASIC20.63■□□□□ 0.89
SLC1A2P43004 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC1A2P43004 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SLC1A2P43004 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SLC1A2P43004 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC1A2P43004 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC1A2P43004 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC1A2P43004 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC1A2P43004 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC1A2P43004 SLC7A5P2-201ENST00000553010 536 ntBASIC20.63■□□□□ 0.89
SLC1A2P43004 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.63■□□□□ 0.89
SLC1A2P43004 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.63■□□□□ 0.89
SLC1A2P43004 AC120498.10-201ENST00000621827 505 ntBASIC20.63■□□□□ 0.89
SLC1A2P43004 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC1A2P43004 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC1A2P43004 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SLC1A2P43004 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC1A2P43004 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.62■□□□□ 0.89
SLC1A2P43004 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC1A2P43004 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC1A2P43004 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC1A2P43004 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC1A2P43004 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC1A2P43004 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC1A2P43004 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC1A2P43004 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC1A2P43004 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SLC1A2P43004 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
SLC1A2P43004 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.62■□□□□ 0.89
SLC1A2P43004 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC1A2P43004 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC1A2P43004 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC1A2P43004 AC245052.3-201ENST00000450182 901 ntBASIC20.62■□□□□ 0.89
SLC1A2P43004 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.62■□□□□ 0.89
SLC1A2P43004 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC1A2P43004 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.62■□□□□ 0.89
SLC1A2P43004 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC1A2P43004 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC1A2P43004 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC1A2P43004 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC1A2P43004 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
SLC1A2P43004 AC027702.1-201ENST00000563810 1770 ntBASIC20.62■□□□□ 0.89
SLC1A2P43004 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC1A2P43004 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC1A2P43004 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SLC1A2P43004 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.61■□□□□ 0.89
SLC1A2P43004 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC1A2P43004 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SLC1A2P43004 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC1A2P43004 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.61■□□□□ 0.89
SLC1A2P43004 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC1A2P43004 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
SLC1A2P43004 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms