Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 SOX15-203ENST00000570788 1093 ntBASIC21.76■■□□□ 1.07
MTHFRP42898 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MTHFRP42898 AC003102.1-202ENST00000563394 1796 ntBASIC21.76■■□□□ 1.07
MTHFRP42898 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MTHFRP42898 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.75■■□□□ 1.07
MTHFRP42898 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
MTHFRP42898 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MTHFRP42898 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
MTHFRP42898 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MTHFRP42898 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MTHFRP42898 AC211429.1-201ENST00000415277 523 ntBASIC21.75■■□□□ 1.07
MTHFRP42898 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.75■■□□□ 1.07
MTHFRP42898 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
MTHFRP42898 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.75■■□□□ 1.07
MTHFRP42898 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.75■■□□□ 1.07
MTHFRP42898 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.75■■□□□ 1.07
MTHFRP42898 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.75■■□□□ 1.07
MTHFRP42898 AC069544.1-201ENST00000609399 999 ntBASIC21.75■■□□□ 1.07
MTHFRP42898 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MTHFRP42898 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
MTHFRP42898 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
MTHFRP42898 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MTHFRP42898 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MTHFRP42898 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MTHFRP42898 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.75■■□□□ 1.07
MTHFRP42898 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
MTHFRP42898 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.74■■□□□ 1.07
MTHFRP42898 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.74■■□□□ 1.07
MTHFRP42898 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
MTHFRP42898 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MTHFRP42898 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MTHFRP42898 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.74■■□□□ 1.07
MTHFRP42898 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.74■■□□□ 1.07
MTHFRP42898 MIR1224-201ENST00000408193 85 ntBASIC21.74■■□□□ 1.07
MTHFRP42898 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
MTHFRP42898 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.74■■□□□ 1.07
MTHFRP42898 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MTHFRP42898 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.74■■□□□ 1.07
MTHFRP42898 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.74■■□□□ 1.07
MTHFRP42898 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.74■■□□□ 1.07
MTHFRP42898 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.74■■□□□ 1.07
MTHFRP42898 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MTHFRP42898 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.74■■□□□ 1.07
MTHFRP42898 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MTHFRP42898 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.74■■□□□ 1.07
MTHFRP42898 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
MTHFRP42898 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
MTHFRP42898 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MTHFRP42898 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MTHFRP42898 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
MTHFRP42898 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.73■■□□□ 1.07
MTHFRP42898 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MTHFRP42898 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MTHFRP42898 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MTHFRP42898 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MTHFRP42898 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MTHFRP42898 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MTHFRP42898 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.73■■□□□ 1.07
MTHFRP42898 AC233263.1-201ENST00000578059 224 ntBASIC21.73■■□□□ 1.07
MTHFRP42898 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.73■■□□□ 1.07
MTHFRP42898 LINC01023-201ENST00000606054 436 ntBASIC21.73■■□□□ 1.07
MTHFRP42898 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MTHFRP42898 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.73■■□□□ 1.07
MTHFRP42898 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
MTHFRP42898 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MTHFRP42898 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MTHFRP42898 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MTHFRP42898 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MTHFRP42898 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MTHFRP42898 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MTHFRP42898 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MTHFRP42898 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
MTHFRP42898 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.72■■□□□ 1.07
MTHFRP42898 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.72■■□□□ 1.07
MTHFRP42898 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.72■■□□□ 1.07
MTHFRP42898 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
MTHFRP42898 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MTHFRP42898 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
MTHFRP42898 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.72■■□□□ 1.07
MTHFRP42898 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.72■■□□□ 1.07
MTHFRP42898 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MTHFRP42898 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MTHFRP42898 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MTHFRP42898 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
MTHFRP42898 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.72■■□□□ 1.07
MTHFRP42898 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.71■■□□□ 1.07
MTHFRP42898 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.71■■□□□ 1.07
MTHFRP42898 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MTHFRP42898 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
MTHFRP42898 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
MTHFRP42898 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.71■■□□□ 1.07
MTHFRP42898 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
MTHFRP42898 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.71■■□□□ 1.07
MTHFRP42898 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
MTHFRP42898 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
MTHFRP42898 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.71■■□□□ 1.07
MTHFRP42898 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MTHFRP42898 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
MTHFRP42898 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.71■■□□□ 1.07
MTHFRP42898 POM121L13P-201ENST00000422362 380 ntBASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms