Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.9■□□□□ 0.3
CEACAM3P40198 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.9■□□□□ 0.3
CEACAM3P40198 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC16.9■□□□□ 0.3
CEACAM3P40198 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.9■□□□□ 0.3
CEACAM3P40198 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC16.9■□□□□ 0.3
CEACAM3P40198 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.9■□□□□ 0.3
CEACAM3P40198 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CEACAM3P40198 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CEACAM3P40198 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CEACAM3P40198 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.89■□□□□ 0.3
CEACAM3P40198 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC16.89■□□□□ 0.29
CEACAM3P40198 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CEACAM3P40198 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.89■□□□□ 0.29
CEACAM3P40198 METTL26-203ENST00000397664 604 ntTSL 2 BASIC16.89■□□□□ 0.29
CEACAM3P40198 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC16.89■□□□□ 0.29
CEACAM3P40198 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
CEACAM3P40198 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.89■□□□□ 0.29
CEACAM3P40198 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CEACAM3P40198 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC16.89■□□□□ 0.29
CEACAM3P40198 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.89■□□□□ 0.29
CEACAM3P40198 AC243732.1-201ENST00000612648 864 ntBASIC16.89■□□□□ 0.29
CEACAM3P40198 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CEACAM3P40198 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CEACAM3P40198 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CEACAM3P40198 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CEACAM3P40198 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
CEACAM3P40198 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CEACAM3P40198 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CEACAM3P40198 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CEACAM3P40198 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CEACAM3P40198 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CEACAM3P40198 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CEACAM3P40198 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CEACAM3P40198 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CEACAM3P40198 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CEACAM3P40198 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC16.88■□□□□ 0.29
CEACAM3P40198 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
CEACAM3P40198 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CEACAM3P40198 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CEACAM3P40198 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC16.88■□□□□ 0.29
CEACAM3P40198 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
CEACAM3P40198 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CEACAM3P40198 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.88■□□□□ 0.29
CEACAM3P40198 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.88■□□□□ 0.29
CEACAM3P40198 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CEACAM3P40198 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CEACAM3P40198 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.88■□□□□ 0.29
CEACAM3P40198 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.88■□□□□ 0.29
CEACAM3P40198 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CEACAM3P40198 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CEACAM3P40198 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CEACAM3P40198 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CEACAM3P40198 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CEACAM3P40198 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CEACAM3P40198 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CEACAM3P40198 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CEACAM3P40198 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CEACAM3P40198 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CEACAM3P40198 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CEACAM3P40198 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CEACAM3P40198 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CEACAM3P40198 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CEACAM3P40198 ME3-201ENST00000323418 1068 ntTSL 5 BASIC16.87■□□□□ 0.29
CEACAM3P40198 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CEACAM3P40198 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CEACAM3P40198 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC16.87■□□□□ 0.29
CEACAM3P40198 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC16.87■□□□□ 0.29
CEACAM3P40198 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC16.87■□□□□ 0.29
CEACAM3P40198 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.87■□□□□ 0.29
CEACAM3P40198 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.87■□□□□ 0.29
CEACAM3P40198 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.87■□□□□ 0.29
CEACAM3P40198 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.87■□□□□ 0.29
CEACAM3P40198 AC010536.3-201ENST00000620306 533 ntBASIC16.87■□□□□ 0.29
CEACAM3P40198 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CEACAM3P40198 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CEACAM3P40198 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CEACAM3P40198 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CEACAM3P40198 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CEACAM3P40198 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CEACAM3P40198 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CEACAM3P40198 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CEACAM3P40198 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CEACAM3P40198 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CEACAM3P40198 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CEACAM3P40198 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CEACAM3P40198 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CEACAM3P40198 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CEACAM3P40198 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CEACAM3P40198 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CEACAM3P40198 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CEACAM3P40198 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CEACAM3P40198 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CEACAM3P40198 RNF165-205ENST00000588679 2904 ntBASIC16.86■□□□□ 0.29
CEACAM3P40198 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC16.86■□□□□ 0.29
CEACAM3P40198 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CEACAM3P40198 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.86■□□□□ 0.29
CEACAM3P40198 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.86■□□□□ 0.29
CEACAM3P40198 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CEACAM3P40198 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
CEACAM3P40198 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms