Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SNCAP37840 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC16.99■□□□□ 0.31
SNCAP37840 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SNCAP37840 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNCAP37840 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNCAP37840 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.99■□□□□ 0.31
SNCAP37840 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SNCAP37840 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
SNCAP37840 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
SNCAP37840 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNCAP37840 AP005212.1-201ENST00000581547 1997 ntBASIC16.99■□□□□ 0.31
SNCAP37840 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
SNCAP37840 PCDHAC2-203ENST00000615316 3011 ntBASIC16.99■□□□□ 0.31
SNCAP37840 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SNCAP37840 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC16.99■□□□□ 0.31
SNCAP37840 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNCAP37840 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
SNCAP37840 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC16.99■□□□□ 0.31
SNCAP37840 DUX4L19-201ENST00000557448 1267 ntBASIC16.99■□□□□ 0.31
SNCAP37840 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNCAP37840 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNCAP37840 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNCAP37840 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC16.99■□□□□ 0.31
SNCAP37840 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNCAP37840 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNCAP37840 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
SNCAP37840 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
SNCAP37840 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.98■□□□□ 0.31
SNCAP37840 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNCAP37840 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNCAP37840 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNCAP37840 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNCAP37840 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNCAP37840 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC16.98■□□□□ 0.31
SNCAP37840 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SNCAP37840 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SNCAP37840 TRIR-205ENST00000592273 783 ntTSL 3 BASIC16.98■□□□□ 0.31
SNCAP37840 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
SNCAP37840 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC16.98■□□□□ 0.31
SNCAP37840 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
SNCAP37840 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.98■□□□□ 0.31
SNCAP37840 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNCAP37840 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNCAP37840 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNCAP37840 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNCAP37840 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNCAP37840 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SNCAP37840 AC026471.6-201ENST00000622954 1905 ntBASIC16.98■□□□□ 0.31
SNCAP37840 SYT6-210ENST00000641643 1587 ntBASIC16.98■□□□□ 0.31
SNCAP37840 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SNCAP37840 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNCAP37840 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SNCAP37840 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SNCAP37840 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNCAP37840 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNCAP37840 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SNCAP37840 HES6-206ENST00000409574 738 ntTSL 2 BASIC16.97■□□□□ 0.31
SNCAP37840 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC16.97■□□□□ 0.31
SNCAP37840 SRR-208ENST00000576848 588 ntTSL 4 BASIC16.97■□□□□ 0.31
SNCAP37840 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SNCAP37840 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SNCAP37840 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SNCAP37840 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNCAP37840 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.97■□□□□ 0.31
SNCAP37840 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNCAP37840 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNCAP37840 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNCAP37840 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNCAP37840 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNCAP37840 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNCAP37840 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SNCAP37840 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SNCAP37840 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SNCAP37840 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNCAP37840 PTCHD3P2-201ENST00000424937 1205 ntBASIC16.96■□□□□ 0.31
SNCAP37840 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SNCAP37840 AL138724.1-201ENST00000606771 1088 ntBASIC16.96■□□□□ 0.31
SNCAP37840 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.96■□□□□ 0.31
SNCAP37840 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC16.96■□□□□ 0.31
SNCAP37840 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNCAP37840 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.96■□□□□ 0.31
SNCAP37840 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.96■□□□□ 0.31
SNCAP37840 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
SNCAP37840 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SNCAP37840 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.96■□□□□ 0.3
SNCAP37840 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.96■□□□□ 0.3
SNCAP37840 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SNCAP37840 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SNCAP37840 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.95■□□□□ 0.3
SNCAP37840 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.95■□□□□ 0.3
SNCAP37840 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.95■□□□□ 0.3
SNCAP37840 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SNCAP37840 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SNCAP37840 RASSF1-AS1-201ENST00000629828 790 ntBASIC16.95■□□□□ 0.3
SNCAP37840 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SNCAP37840 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNCAP37840 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.95■□□□□ 0.3
SNCAP37840 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNCAP37840 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC16.95■□□□□ 0.3
SNCAP37840 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms