Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CKS2P33552 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CKS2P33552 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CKS2P33552 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CKS2P33552 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CKS2P33552 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CKS2P33552 AL020996.1-203ENST00000536896 2307 ntBASIC15.23■□□□□ 0.03
CKS2P33552 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CKS2P33552 AC020907.5-201ENST00000624372 1936 ntBASIC15.23■□□□□ 0.03
CKS2P33552 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CKS2P33552 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC15.23■□□□□ 0.03
CKS2P33552 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CKS2P33552 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CKS2P33552 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CKS2P33552 RARRES2P2-201ENST00000394842 485 ntBASIC15.23■□□□□ 0.03
CKS2P33552 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CKS2P33552 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CKS2P33552 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CKS2P33552 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CKS2P33552 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CKS2P33552 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CKS2P33552 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CKS2P33552 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CKS2P33552 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC15.23■□□□□ 0.03
CKS2P33552 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CKS2P33552 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CKS2P33552 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CKS2P33552 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CKS2P33552 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CKS2P33552 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC15.23■□□□□ 0.03
CKS2P33552 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC15.23■□□□□ 0.03
CKS2P33552 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CKS2P33552 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CKS2P33552 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CKS2P33552 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CKS2P33552 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CKS2P33552 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CKS2P33552 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CKS2P33552 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
CKS2P33552 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CKS2P33552 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CKS2P33552 BEX3-202ENST00000372634 753 ntTSL 2 BASIC15.22■□□□□ 0.03
CKS2P33552 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CKS2P33552 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CKS2P33552 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CKS2P33552 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
CKS2P33552 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CKS2P33552 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CKS2P33552 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CKS2P33552 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CKS2P33552 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CKS2P33552 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CKS2P33552 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CKS2P33552 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CKS2P33552 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CKS2P33552 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CKS2P33552 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC15.21■□□□□ 0.03
CKS2P33552 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC15.21■□□□□ 0.03
CKS2P33552 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CKS2P33552 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CKS2P33552 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CKS2P33552 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CKS2P33552 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CKS2P33552 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CKS2P33552 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CKS2P33552 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CKS2P33552 AL034346.1-201ENST00000568244 1277 ntBASIC15.21■□□□□ 0.03
CKS2P33552 AC010980.1-201ENST00000587192 1142 ntBASIC15.21■□□□□ 0.03
CKS2P33552 AC137630.3-201ENST00000607245 391 ntBASIC15.21■□□□□ 0.03
CKS2P33552 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC15.21■□□□□ 0.03
CKS2P33552 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CKS2P33552 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC15.21■□□□□ 0.03
CKS2P33552 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CKS2P33552 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CKS2P33552 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC15.21■□□□□ 0.03
CKS2P33552 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CKS2P33552 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CKS2P33552 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC15.21■□□□□ 0.02
CKS2P33552 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CKS2P33552 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC15.21■□□□□ 0.02
CKS2P33552 AC112907.3-201ENST00000577781 2400 ntBASIC15.21■□□□□ 0.02
CKS2P33552 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CKS2P33552 BCL2-203ENST00000589955 5011 ntBASIC15.2■□□□□ 0.02
CKS2P33552 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CKS2P33552 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CKS2P33552 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC15.2■□□□□ 0.02
CKS2P33552 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CKS2P33552 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CKS2P33552 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC15.2■□□□□ 0.02
CKS2P33552 AC003102.1-202ENST00000563394 1796 ntBASIC15.2■□□□□ 0.02
CKS2P33552 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CKS2P33552 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CKS2P33552 MCC-208ENST00000514701 2855 ntTSL 2 BASIC15.2■□□□□ 0.02
CKS2P33552 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CKS2P33552 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CKS2P33552 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CKS2P33552 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CKS2P33552 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CKS2P33552 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CKS2P33552 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms