Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PTPN3P26045 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PTPN3P26045 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.14■□□□□ 0.98
PTPN3P26045 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PTPN3P26045 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.14■□□□□ 0.98
PTPN3P26045 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.98
PTPN3P26045 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.14■□□□□ 0.98
PTPN3P26045 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN3P26045 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.14■□□□□ 0.97
PTPN3P26045 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN3P26045 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN3P26045 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN3P26045 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.14■□□□□ 0.97
PTPN3P26045 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN3P26045 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN3P26045 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.14■□□□□ 0.97
PTPN3P26045 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.14■□□□□ 0.97
PTPN3P26045 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN3P26045 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN3P26045 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN3P26045 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN3P26045 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.14■□□□□ 0.97
PTPN3P26045 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN3P26045 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN3P26045 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN3P26045 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.14■□□□□ 0.97
PTPN3P26045 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN3P26045 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PTPN3P26045 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.13■□□□□ 0.97
PTPN3P26045 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PTPN3P26045 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTPN3P26045 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PTPN3P26045 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PTPN3P26045 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.13■□□□□ 0.97
PTPN3P26045 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTPN3P26045 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.13■□□□□ 0.97
PTPN3P26045 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTPN3P26045 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTPN3P26045 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
PTPN3P26045 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.13■□□□□ 0.97
PTPN3P26045 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.13■□□□□ 0.97
PTPN3P26045 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.13■□□□□ 0.97
PTPN3P26045 AC011484.1-201ENST00000377652 1995 ntBASIC21.13■□□□□ 0.97
PTPN3P26045 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
PTPN3P26045 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTPN3P26045 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PTPN3P26045 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PTPN3P26045 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
PTPN3P26045 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTPN3P26045 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTPN3P26045 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.13■□□□□ 0.97
PTPN3P26045 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN3P26045 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN3P26045 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN3P26045 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN3P26045 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN3P26045 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN3P26045 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
PTPN3P26045 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN3P26045 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN3P26045 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.12■□□□□ 0.97
PTPN3P26045 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.12■□□□□ 0.97
PTPN3P26045 SLC7A5P1-201ENST00000568957 537 ntBASIC21.12■□□□□ 0.97
PTPN3P26045 UBE2DNL-204ENST00000602536 740 ntBASIC21.12■□□□□ 0.97
PTPN3P26045 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.12■□□□□ 0.97
PTPN3P26045 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
PTPN3P26045 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN3P26045 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
PTPN3P26045 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN3P26045 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN3P26045 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
PTPN3P26045 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.12■□□□□ 0.97
PTPN3P26045 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN3P26045 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN3P26045 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.11■□□□□ 0.97
PTPN3P26045 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.11■□□□□ 0.97
PTPN3P26045 KRT18P5-201ENST00000436075 1291 ntBASIC21.11■□□□□ 0.97
PTPN3P26045 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN3P26045 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.11■□□□□ 0.97
PTPN3P26045 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.11■□□□□ 0.97
PTPN3P26045 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.11■□□□□ 0.97
PTPN3P26045 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN3P26045 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN3P26045 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN3P26045 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN3P26045 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
PTPN3P26045 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
PTPN3P26045 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.11■□□□□ 0.97
PTPN3P26045 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN3P26045 AL157384.1-201ENST00000445995 2473 ntBASIC21.11■□□□□ 0.97
PTPN3P26045 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTPN3P26045 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PTPN3P26045 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTPN3P26045 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.1■□□□□ 0.97
PTPN3P26045 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTPN3P26045 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTPN3P26045 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PTPN3P26045 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTPN3P26045 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTPN3P26045 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms