Protein–RNA interactions for Protein: P25847

MSH2, DNA mismatch repair protein MSH2, yeastyeast

Predictions only

Length 964 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH2P25847 DFG10YIL049W 762 nt3.77□□□□□ -1.81
MSH2P25847 DAD2YKR083C 402 nt3.77□□□□□ -1.81
MSH2P25847 COX19YLL018C-A 297 nt3.77□□□□□ -1.81
MSH2P25847 ATG3YNR007C 933 nt3.77□□□□□ -1.81
MSH2P25847 OST2YOR103C 393 nt3.77□□□□□ -1.81
MSH2P25847 ARR2YPR200C 393 nt3.77□□□□□ -1.81
MSH2P25847 snR41snR41 95 nt3.77□□□□□ -1.81
MSH2P25847 HFD1YMR110C 1599 nt3.76□□□□□ -1.81
MSH2P25847 SLP1YOR154W 1764 nt3.76□□□□□ -1.81
MSH2P25847 SMC2YFR031C 3513 nt3.76□□□□□ -1.81
MSH2P25847 ATG21YPL100W 1491 nt3.76□□□□□ -1.81
MSH2P25847 YDR114CYDR114C 303 nt3.76□□□□□ -1.81
MSH2P25847 tR(ACG)Q2tR(ACG)Q2 74 nt3.76□□□□□ -1.81
MSH2P25847 RPL23AYBL087C 414 nt3.76□□□□□ -1.81
MSH2P25847 YBR076C-AYBR076C-A 267 nt3.76□□□□□ -1.81
MSH2P25847 VID24YBR105C 1089 nt3.76□□□□□ -1.81
MSH2P25847 BNI4YNL233W 2679 nt3.76□□□□□ -1.81
MSH2P25847 RSF2YJR127C 4143 nt3.76□□□□□ -1.81
MSH2P25847 MYO5YMR109W 3660 nt3.75□□□□□ -1.81
MSH2P25847 RTR2YDR066C 591 nt3.75□□□□□ -1.81
MSH2P25847 YDR118W-AYDR118W-A 117 nt3.75□□□□□ -1.81
MSH2P25847 LSM8YJR022W 330 nt3.75□□□□□ -1.81
MSH2P25847 HRI1YLR301W 735 nt3.75□□□□□ -1.81
MSH2P25847 RHO5YNL180C 996 nt3.75□□□□□ -1.81
MSH2P25847 EMP70YLR083C 2004 nt3.75□□□□□ -1.81
MSH2P25847 SSF2YDR312W 1362 nt3.75□□□□□ -1.81
MSH2P25847 NUP159YIL115C 4383 nt3.74□□□□□ -1.81
MSH2P25847 AGA2YGL032C 264 nt3.74□□□□□ -1.81
MSH2P25847 NGL1YOL042W 1092 nt3.74□□□□□ -1.81
MSH2P25847 ALG14YBR070C 714 nt3.74□□□□□ -1.81
MSH2P25847 LCB4YOR171C 1875 nt3.73□□□□□ -1.81
MSH2P25847 VPS3YDR495C 3036 nt3.73□□□□□ -1.81
MSH2P25847 RPS26BYER131W 360 nt3.73□□□□□ -1.81
MSH2P25847 ECO1YFR027W 846 nt3.73□□□□□ -1.81
MSH2P25847 YGR017WYGR017W 894 nt3.73□□□□□ -1.81
MSH2P25847 OTU2YHL013C 924 nt3.73□□□□□ -1.81
MSH2P25847 YNL046WYNL046W 519 nt3.73□□□□□ -1.81
MSH2P25847 RIO2YNL207W 1278 nt3.73□□□□□ -1.81
MSH2P25847 ATP22YDR350C 2055 nt3.73□□□□□ -1.81
MSH2P25847 ARK1YNL020C 1917 nt3.73□□□□□ -1.81
MSH2P25847 STN1YDR082W 1485 nt3.73□□□□□ -1.81
MSH2P25847 SIZ1YDR409W 2715 nt3.72□□□□□ -1.81
MSH2P25847 ALY1YKR021W 2748 nt3.72□□□□□ -1.81
MSH2P25847 HAA1YPR008W 2085 nt3.72□□□□□ -1.81
MSH2P25847 AHC2YCR082W 387 nt3.72□□□□□ -1.81
MSH2P25847 YDR250CYDR250C 276 nt3.72□□□□□ -1.81
MSH2P25847 BIG1YHR101C 1008 nt3.72□□□□□ -1.81
MSH2P25847 SPC1YJR010C-A 285 nt3.72□□□□□ -1.81
MSH2P25847 SEN15YMR059W 387 nt3.72□□□□□ -1.81
MSH2P25847 DDR48YMR173W 1293 nt3.72□□□□□ -1.81
MSH2P25847 RDS1YCR106W 2499 nt3.72□□□□□ -1.81
MSH2P25847 PRP22YER013W 3438 nt3.72□□□□□ -1.81
MSH2P25847 YCK2YNL154C 1641 nt3.71□□□□□ -1.82
MSH2P25847 MES1YGR264C 2256 nt3.71□□□□□ -1.82
MSH2P25847 PPH3YDR075W 927 nt3.71□□□□□ -1.82
MSH2P25847 YDR464C-AYDR464C-A 189 nt3.71□□□□□ -1.82
MSH2P25847 NSA2YER126C 786 nt3.71□□□□□ -1.82
MSH2P25847 SPT4YGR063C 309 nt3.71□□□□□ -1.82
MSH2P25847 YHL046W-AYHL046W-A 327 nt3.71□□□□□ -1.82
MSH2P25847 YLR334CYLR334C 381 nt3.71□□□□□ -1.82
MSH2P25847 OST6YML019W 999 nt3.71□□□□□ -1.82
MSH2P25847 YNL146C-AYNL146C-A 195 nt3.71□□□□□ -1.82
MSH2P25847 GDI1YER136W 1356 nt3.71□□□□□ -1.82
MSH2P25847 FAA2YER015W 2235 nt3.71□□□□□ -1.82
MSH2P25847 NSP1YJL041W 2472 nt3.7□□□□□ -1.82
MSH2P25847 YCR064CYCR064C 411 nt3.7□□□□□ -1.82
MSH2P25847 RTS3YGR161C 792 nt3.7□□□□□ -1.82
MSH2P25847 MRP8YKL142W 660 nt3.7□□□□□ -1.82
MSH2P25847 ARV1YLR242C 966 nt3.7□□□□□ -1.82
MSH2P25847 RPL19BYBL027W 570 nt3.7□□□□□ -1.82
MSH2P25847 YMR001C-AYMR001C-A 231 nt3.7□□□□□ -1.82
MSH2P25847 TVP18YMR071C 504 nt3.7□□□□□ -1.82
MSH2P25847 YMR153C-AYMR153C-A 336 nt3.7□□□□□ -1.82
MSH2P25847 KAP95YLR347C 2586 nt3.69□□□□□ -1.82
MSH2P25847 HEF3YNL014W 3135 nt3.69□□□□□ -1.82
MSH2P25847 YKR078WYKR078W 1758 nt3.69□□□□□ -1.82
MSH2P25847 GET1YGL020C 708 nt3.69□□□□□ -1.82
MSH2P25847 SDP1YIL113W 630 nt3.69□□□□□ -1.82
MSH2P25847 CAT5YOR125C 702 nt3.69□□□□□ -1.82
MSH2P25847 PPN1YDR452W 2025 nt3.69□□□□□ -1.82
MSH2P25847 PAM1YDR251W 2493 nt3.69□□□□□ -1.82
MSH2P25847 YDR034C-DYDR034C-D 5313 nt3.69□□□□□ -1.82
MSH2P25847 PCI8YIL071C 1335 nt3.69□□□□□ -1.82
MSH2P25847 MUD2YKL074C 1584 nt3.68□□□□□ -1.82
MSH2P25847 YLR352WYLR352W 2424 nt3.68□□□□□ -1.82
MSH2P25847 GIM4YEL003W 336 nt3.68□□□□□ -1.82
MSH2P25847 YGL042CYGL042C 306 nt3.68□□□□□ -1.82
MSH2P25847 YGL074CYGL074C 327 nt3.68□□□□□ -1.82
MSH2P25847 SOD1YJR104C 465 nt3.68□□□□□ -1.82
MSH2P25847 YLR406C-AYLR406C-A 150 nt3.68□□□□□ -1.82
MSH2P25847 YML108WYML108W 318 nt3.68□□□□□ -1.82
MSH2P25847 NOP15YNL110C 663 nt3.68□□□□□ -1.82
MSH2P25847 HEM4YOR278W 828 nt3.68□□□□□ -1.82
MSH2P25847 RRD2YPL152W 1077 nt3.68□□□□□ -1.82
MSH2P25847 snR54snR54 86 nt3.68□□□□□ -1.82
MSH2P25847 VPS53YJL029C 2469 nt3.68□□□□□ -1.82
MSH2P25847 CDC45YLR103C 1953 nt3.67□□□□□ -1.82
MSH2P25847 YJR030CYJR030C 2238 nt3.67□□□□□ -1.82
MSH2P25847 NMA111YNL123W 2994 nt3.67□□□□□ -1.82
MSH2P25847 AIM29YKR074W 468 nt3.67□□□□□ -1.82
Retrieved 100 of 7,029 protein–RNA pairs in 17.1 ms