Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NR4A1P22736 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NR4A1P22736 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NR4A1P22736 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
NR4A1P22736 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NR4A1P22736 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.14■□□□□ 0.66
NR4A1P22736 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
NR4A1P22736 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NR4A1P22736 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.14■□□□□ 0.65
NR4A1P22736 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NR4A1P22736 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.14■□□□□ 0.65
NR4A1P22736 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
NR4A1P22736 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.14■□□□□ 0.65
NR4A1P22736 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NR4A1P22736 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NR4A1P22736 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.14■□□□□ 0.65
NR4A1P22736 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NR4A1P22736 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.14■□□□□ 0.65
NR4A1P22736 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NR4A1P22736 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.14■□□□□ 0.65
NR4A1P22736 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
NR4A1P22736 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
NR4A1P22736 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
NR4A1P22736 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NR4A1P22736 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.14■□□□□ 0.65
NR4A1P22736 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
NR4A1P22736 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NR4A1P22736 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.13■□□□□ 0.65
NR4A1P22736 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NR4A1P22736 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.13■□□□□ 0.65
NR4A1P22736 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.13■□□□□ 0.65
NR4A1P22736 AP001330.3-201ENST00000520123 633 ntBASIC19.13■□□□□ 0.65
NR4A1P22736 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.13■□□□□ 0.65
NR4A1P22736 AL136967.2-201ENST00000623968 743 ntBASIC19.13■□□□□ 0.65
NR4A1P22736 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.13■□□□□ 0.65
NR4A1P22736 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NR4A1P22736 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.13■□□□□ 0.65
NR4A1P22736 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NR4A1P22736 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.13■□□□□ 0.65
NR4A1P22736 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
NR4A1P22736 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
NR4A1P22736 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NR4A1P22736 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NR4A1P22736 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
NR4A1P22736 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NR4A1P22736 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NR4A1P22736 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NR4A1P22736 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NR4A1P22736 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
NR4A1P22736 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NR4A1P22736 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.12■□□□□ 0.65
NR4A1P22736 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
NR4A1P22736 MIR939-201ENST00000401314 82 ntBASIC19.12■□□□□ 0.65
NR4A1P22736 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.12■□□□□ 0.65
NR4A1P22736 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
NR4A1P22736 AF213884.3-201ENST00000563833 479 ntBASIC19.12■□□□□ 0.65
NR4A1P22736 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
NR4A1P22736 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NR4A1P22736 AC112907.3-201ENST00000577781 2400 ntBASIC19.12■□□□□ 0.65
NR4A1P22736 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NR4A1P22736 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NR4A1P22736 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.12■□□□□ 0.65
NR4A1P22736 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NR4A1P22736 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
NR4A1P22736 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NR4A1P22736 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NR4A1P22736 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NR4A1P22736 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NR4A1P22736 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NR4A1P22736 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.11■□□□□ 0.65
NR4A1P22736 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NR4A1P22736 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NR4A1P22736 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NR4A1P22736 BX842568.3-201ENST00000418104 571 ntBASIC19.11■□□□□ 0.65
NR4A1P22736 AC008764.7-201ENST00000593779 1081 ntBASIC19.11■□□□□ 0.65
NR4A1P22736 AC233992.3-201ENST00000607491 485 ntBASIC19.11■□□□□ 0.65
NR4A1P22736 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NR4A1P22736 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
NR4A1P22736 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.11■□□□□ 0.65
NR4A1P22736 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.11■□□□□ 0.65
NR4A1P22736 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NR4A1P22736 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.11■□□□□ 0.65
NR4A1P22736 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
NR4A1P22736 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NR4A1P22736 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NR4A1P22736 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NR4A1P22736 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
NR4A1P22736 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.11■□□□□ 0.65
NR4A1P22736 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NR4A1P22736 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NR4A1P22736 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NR4A1P22736 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NR4A1P22736 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
NR4A1P22736 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.1■□□□□ 0.65
NR4A1P22736 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NR4A1P22736 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NR4A1P22736 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NR4A1P22736 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NR4A1P22736 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.1■□□□□ 0.65
NR4A1P22736 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms