Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCL1P22362 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCL1P22362 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CCL1P22362 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCL1P22362 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCL1P22362 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCL1P22362 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CCL1P22362 FP700111.2-201ENST00000619190 1892 ntBASIC17.87■□□□□ 0.45
CCL1P22362 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCL1P22362 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCL1P22362 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.87■□□□□ 0.45
CCL1P22362 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CCL1P22362 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCL1P22362 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCL1P22362 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.87■□□□□ 0.45
CCL1P22362 AC010141.2-201ENST00000452426 721 ntBASIC17.87■□□□□ 0.45
CCL1P22362 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.87■□□□□ 0.45
CCL1P22362 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.87■□□□□ 0.45
CCL1P22362 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.87■□□□□ 0.45
CCL1P22362 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.87■□□□□ 0.45
CCL1P22362 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CCL1P22362 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCL1P22362 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCL1P22362 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCL1P22362 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCL1P22362 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CCL1P22362 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
CCL1P22362 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCL1P22362 AC105265.2-201ENST00000467189 838 ntBASIC17.86■□□□□ 0.45
CCL1P22362 AC005837.3-201ENST00000612163 286 ntBASIC17.86■□□□□ 0.45
CCL1P22362 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CCL1P22362 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCL1P22362 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCL1P22362 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCL1P22362 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCL1P22362 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.86■□□□□ 0.45
CCL1P22362 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCL1P22362 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.86■□□□□ 0.45
CCL1P22362 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCL1P22362 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCL1P22362 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCL1P22362 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCL1P22362 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCL1P22362 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CCL1P22362 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.85■□□□□ 0.45
CCL1P22362 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCL1P22362 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCL1P22362 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CCL1P22362 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCL1P22362 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CCL1P22362 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCL1P22362 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.85■□□□□ 0.45
CCL1P22362 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.85■□□□□ 0.45
CCL1P22362 AC245052.3-201ENST00000450182 901 ntBASIC17.85■□□□□ 0.45
CCL1P22362 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.85■□□□□ 0.45
CCL1P22362 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCL1P22362 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.85■□□□□ 0.45
CCL1P22362 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CCL1P22362 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.85■□□□□ 0.45
CCL1P22362 AL162377.1-201ENST00000618844 1793 ntBASIC17.85■□□□□ 0.45
CCL1P22362 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.85■□□□□ 0.45
CCL1P22362 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
CCL1P22362 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCL1P22362 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCL1P22362 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CCL1P22362 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCL1P22362 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCL1P22362 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCL1P22362 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.84■□□□□ 0.45
CCL1P22362 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCL1P22362 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.84■□□□□ 0.45
CCL1P22362 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
CCL1P22362 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCL1P22362 LINC02228-203ENST00000641970 1355 ntBASIC17.84■□□□□ 0.45
CCL1P22362 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCL1P22362 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.84■□□□□ 0.45
CCL1P22362 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCL1P22362 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.84■□□□□ 0.45
CCL1P22362 AC120498.10-201ENST00000621827 505 ntBASIC17.84■□□□□ 0.45
CCL1P22362 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.84■□□□□ 0.45
CCL1P22362 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CCL1P22362 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCL1P22362 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.84■□□□□ 0.45
CCL1P22362 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCL1P22362 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.83■□□□□ 0.45
CCL1P22362 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CCL1P22362 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.45
CCL1P22362 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCL1P22362 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.83■□□□□ 0.45
CCL1P22362 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CCL1P22362 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
CCL1P22362 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCL1P22362 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCL1P22362 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCL1P22362 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCL1P22362 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCL1P22362 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCL1P22362 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCL1P22362 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCL1P22362 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms