Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 KRT18P11-201ENST00000435214 1283 ntBASIC20.92■□□□□ 0.94
HLA-DPA1P20036 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DPA1P20036 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.92■□□□□ 0.94
HLA-DPA1P20036 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.92■□□□□ 0.94
HLA-DPA1P20036 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.92■□□□□ 0.94
HLA-DPA1P20036 AC243732.1-201ENST00000612648 864 ntBASIC20.92■□□□□ 0.94
HLA-DPA1P20036 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DPA1P20036 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.92■□□□□ 0.94
HLA-DPA1P20036 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
HLA-DPA1P20036 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-DPA1P20036 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-DPA1P20036 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-DPA1P20036 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.91■□□□□ 0.94
HLA-DPA1P20036 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-DPA1P20036 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-DPA1P20036 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.91■□□□□ 0.94
HLA-DPA1P20036 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-DPA1P20036 AC137761.2-201ENST00000561729 223 ntBASIC20.91■□□□□ 0.94
HLA-DPA1P20036 AC145350.3-201ENST00000569033 163 ntBASIC20.91■□□□□ 0.94
HLA-DPA1P20036 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.91■□□□□ 0.94
HLA-DPA1P20036 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-DPA1P20036 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.91■□□□□ 0.94
HLA-DPA1P20036 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-DPA1P20036 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.91■□□□□ 0.94
HLA-DPA1P20036 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-DPA1P20036 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
HLA-DPA1P20036 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
HLA-DPA1P20036 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-DPA1P20036 AC121338.2-201ENST00000622535 1744 ntBASIC20.9■□□□□ 0.94
HLA-DPA1P20036 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-DPA1P20036 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
HLA-DPA1P20036 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-DPA1P20036 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
HLA-DPA1P20036 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.9■□□□□ 0.94
HLA-DPA1P20036 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
HLA-DPA1P20036 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.9■□□□□ 0.94
HLA-DPA1P20036 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-DPA1P20036 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-DPA1P20036 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-DPA1P20036 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-DPA1P20036 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
HLA-DPA1P20036 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HLA-DPA1P20036 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.89■□□□□ 0.94
HLA-DPA1P20036 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HLA-DPA1P20036 RBM17P2-201ENST00000616397 1405 ntBASIC20.89■□□□□ 0.94
HLA-DPA1P20036 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.89■□□□□ 0.93
HLA-DPA1P20036 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HLA-DPA1P20036 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.89■□□□□ 0.93
HLA-DPA1P20036 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.89■□□□□ 0.93
HLA-DPA1P20036 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.89■□□□□ 0.93
HLA-DPA1P20036 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
HLA-DPA1P20036 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.89■□□□□ 0.93
HLA-DPA1P20036 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HLA-DPA1P20036 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HLA-DPA1P20036 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HLA-DPA1P20036 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HLA-DPA1P20036 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
HLA-DPA1P20036 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-DPA1P20036 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-DPA1P20036 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-DPA1P20036 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-DPA1P20036 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-DPA1P20036 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-DPA1P20036 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
HLA-DPA1P20036 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.88■□□□□ 0.93
HLA-DPA1P20036 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.88■□□□□ 0.93
HLA-DPA1P20036 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-DPA1P20036 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
HLA-DPA1P20036 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.88■□□□□ 0.93
HLA-DPA1P20036 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
HLA-DPA1P20036 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.88■□□□□ 0.93
HLA-DPA1P20036 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-DPA1P20036 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-DPA1P20036 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
HLA-DPA1P20036 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
HLA-DPA1P20036 AC011484.1-201ENST00000377652 1995 ntBASIC20.87■□□□□ 0.93
HLA-DPA1P20036 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.87■□□□□ 0.93
HLA-DPA1P20036 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HLA-DPA1P20036 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HLA-DPA1P20036 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.87■□□□□ 0.93
HLA-DPA1P20036 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.87■□□□□ 0.93
HLA-DPA1P20036 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HLA-DPA1P20036 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
HLA-DPA1P20036 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HLA-DPA1P20036 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HLA-DPA1P20036 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
HLA-DPA1P20036 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HLA-DPA1P20036 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.87■□□□□ 0.93
HLA-DPA1P20036 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HLA-DPA1P20036 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
HLA-DPA1P20036 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.87■□□□□ 0.93
HLA-DPA1P20036 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.86■□□□□ 0.93
HLA-DPA1P20036 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HLA-DPA1P20036 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HLA-DPA1P20036 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HLA-DPA1P20036 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
HLA-DPA1P20036 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.86■□□□□ 0.93
HLA-DPA1P20036 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HLA-DPA1P20036 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HLA-DPA1P20036 AC016769.1-201ENST00000409132 1010 ntBASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms