Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.09■□□□□ 0.97
NFKB1P19838 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.08■□□□□ 0.97
NFKB1P19838 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.08■□□□□ 0.97
NFKB1P19838 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NFKB1P19838 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NFKB1P19838 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NFKB1P19838 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
NFKB1P19838 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
NFKB1P19838 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NFKB1P19838 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.08■□□□□ 0.97
NFKB1P19838 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
NFKB1P19838 UBE2DNL-204ENST00000602536 740 ntBASIC21.08■□□□□ 0.97
NFKB1P19838 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.08■□□□□ 0.97
NFKB1P19838 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NFKB1P19838 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NFKB1P19838 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.08■□□□□ 0.96
NFKB1P19838 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NFKB1P19838 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
NFKB1P19838 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NFKB1P19838 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NFKB1P19838 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.07■□□□□ 0.96
NFKB1P19838 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NFKB1P19838 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NFKB1P19838 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.07■□□□□ 0.96
NFKB1P19838 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
NFKB1P19838 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NFKB1P19838 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
NFKB1P19838 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
NFKB1P19838 KRT18P5-201ENST00000436075 1291 ntBASIC21.07■□□□□ 0.96
NFKB1P19838 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NFKB1P19838 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.07■□□□□ 0.96
NFKB1P19838 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.07■□□□□ 0.96
NFKB1P19838 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.07■□□□□ 0.96
NFKB1P19838 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.07■□□□□ 0.96
NFKB1P19838 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NFKB1P19838 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NFKB1P19838 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.07■□□□□ 0.96
NFKB1P19838 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NFKB1P19838 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.07■□□□□ 0.96
NFKB1P19838 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.07■□□□□ 0.96
NFKB1P19838 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NFKB1P19838 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
NFKB1P19838 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
NFKB1P19838 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NFKB1P19838 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NFKB1P19838 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NFKB1P19838 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NFKB1P19838 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NFKB1P19838 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
NFKB1P19838 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
NFKB1P19838 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
NFKB1P19838 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NFKB1P19838 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.06■□□□□ 0.96
NFKB1P19838 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
NFKB1P19838 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
NFKB1P19838 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.06■□□□□ 0.96
NFKB1P19838 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NFKB1P19838 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
NFKB1P19838 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
NFKB1P19838 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NFKB1P19838 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
NFKB1P19838 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NFKB1P19838 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.05■□□□□ 0.96
NFKB1P19838 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.05■□□□□ 0.96
NFKB1P19838 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.05■□□□□ 0.96
NFKB1P19838 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
NFKB1P19838 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NFKB1P19838 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NFKB1P19838 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NFKB1P19838 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NFKB1P19838 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NFKB1P19838 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.05■□□□□ 0.96
NFKB1P19838 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
NFKB1P19838 AC011484.1-201ENST00000377652 1995 ntBASIC21.05■□□□□ 0.96
NFKB1P19838 AL157384.1-201ENST00000445995 2473 ntBASIC21.04■□□□□ 0.96
NFKB1P19838 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NFKB1P19838 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
NFKB1P19838 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
NFKB1P19838 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NFKB1P19838 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.04■□□□□ 0.96
NFKB1P19838 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.04■□□□□ 0.96
NFKB1P19838 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.04■□□□□ 0.96
NFKB1P19838 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NFKB1P19838 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NFKB1P19838 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NFKB1P19838 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NFKB1P19838 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NFKB1P19838 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.03■□□□□ 0.96
NFKB1P19838 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
NFKB1P19838 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NFKB1P19838 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
NFKB1P19838 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NFKB1P19838 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
NFKB1P19838 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NFKB1P19838 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
NFKB1P19838 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NFKB1P19838 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NFKB1P19838 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.03■□□□□ 0.96
NFKB1P19838 SLC7A5P1-201ENST00000568957 537 ntBASIC21.03■□□□□ 0.96
NFKB1P19838 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms