Protein–RNA interactions for Protein: P13995

MTHFD2, Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2P13995 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MTHFD2P13995 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MTHFD2P13995 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MTHFD2P13995 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.23■□□□□ 0.83
MTHFD2P13995 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
MTHFD2P13995 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
MTHFD2P13995 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MTHFD2P13995 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MTHFD2P13995 KRT16P2-201ENST00000414673 1423 ntBASIC20.23■□□□□ 0.83
MTHFD2P13995 AC123595.1-201ENST00000440769 1046 ntBASIC20.23■□□□□ 0.83
MTHFD2P13995 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.23■□□□□ 0.83
MTHFD2P13995 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.23■□□□□ 0.83
MTHFD2P13995 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.23■□□□□ 0.83
MTHFD2P13995 TERF1P2-201ENST00000583350 1212 ntBASIC20.23■□□□□ 0.83
MTHFD2P13995 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MTHFD2P13995 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MTHFD2P13995 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
MTHFD2P13995 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
MTHFD2P13995 FP700111.2-201ENST00000619190 1892 ntBASIC20.22■□□□□ 0.83
MTHFD2P13995 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MTHFD2P13995 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MTHFD2P13995 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
MTHFD2P13995 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.22■□□□□ 0.83
MTHFD2P13995 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MTHFD2P13995 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MTHFD2P13995 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.22■□□□□ 0.83
MTHFD2P13995 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MTHFD2P13995 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MTHFD2P13995 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.22■□□□□ 0.83
MTHFD2P13995 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.22■□□□□ 0.83
MTHFD2P13995 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.22■□□□□ 0.83
MTHFD2P13995 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.22■□□□□ 0.83
MTHFD2P13995 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MTHFD2P13995 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
MTHFD2P13995 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
MTHFD2P13995 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.22■□□□□ 0.83
MTHFD2P13995 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MTHFD2P13995 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MTHFD2P13995 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MTHFD2P13995 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MTHFD2P13995 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.21■□□□□ 0.83
MTHFD2P13995 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
MTHFD2P13995 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MTHFD2P13995 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MTHFD2P13995 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MTHFD2P13995 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.21■□□□□ 0.83
MTHFD2P13995 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MTHFD2P13995 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MTHFD2P13995 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.21■□□□□ 0.83
MTHFD2P13995 AC104187.1-201ENST00000607510 612 ntBASIC20.21■□□□□ 0.83
MTHFD2P13995 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
MTHFD2P13995 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
MTHFD2P13995 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.21■□□□□ 0.83
MTHFD2P13995 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
MTHFD2P13995 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.21■□□□□ 0.83
MTHFD2P13995 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MTHFD2P13995 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
MTHFD2P13995 AC020907.5-201ENST00000624372 1936 ntBASIC20.21■□□□□ 0.83
MTHFD2P13995 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
MTHFD2P13995 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
MTHFD2P13995 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.21■□□□□ 0.83
MTHFD2P13995 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
MTHFD2P13995 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
MTHFD2P13995 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
MTHFD2P13995 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
MTHFD2P13995 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
MTHFD2P13995 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
MTHFD2P13995 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MTHFD2P13995 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
MTHFD2P13995 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.2■□□□□ 0.82
MTHFD2P13995 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
MTHFD2P13995 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
MTHFD2P13995 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MTHFD2P13995 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MTHFD2P13995 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.19■□□□□ 0.82
MTHFD2P13995 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MTHFD2P13995 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MTHFD2P13995 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
MTHFD2P13995 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.19■□□□□ 0.82
MTHFD2P13995 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MTHFD2P13995 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MTHFD2P13995 YBX1P1-201ENST00000445822 960 ntBASIC20.19■□□□□ 0.82
MTHFD2P13995 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.19■□□□□ 0.82
MTHFD2P13995 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MTHFD2P13995 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
MTHFD2P13995 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MTHFD2P13995 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MTHFD2P13995 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MTHFD2P13995 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
MTHFD2P13995 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MTHFD2P13995 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MTHFD2P13995 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
MTHFD2P13995 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MTHFD2P13995 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.18■□□□□ 0.82
MTHFD2P13995 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.18■□□□□ 0.82
MTHFD2P13995 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
MTHFD2P13995 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.18■□□□□ 0.82
MTHFD2P13995 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.18■□□□□ 0.82
MTHFD2P13995 SLC7A5P2-201ENST00000553010 536 ntBASIC20.18■□□□□ 0.82
MTHFD2P13995 DUX4L2-201ENST00000561772 1275 ntBASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms