Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.78■□□□□ 0.28
DEFA4P12838 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DEFA4P12838 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DEFA4P12838 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
DEFA4P12838 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
DEFA4P12838 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
DEFA4P12838 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC16.78■□□□□ 0.28
DEFA4P12838 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC16.78■□□□□ 0.28
DEFA4P12838 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
DEFA4P12838 SMUG1P1-201ENST00000590640 811 ntBASIC16.78■□□□□ 0.28
DEFA4P12838 AC110285.6-201ENST00000617652 491 ntBASIC16.78■□□□□ 0.28
DEFA4P12838 AC105233.4-201ENST00000642045 216 ntBASIC16.78■□□□□ 0.28
DEFA4P12838 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DEFA4P12838 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
DEFA4P12838 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
DEFA4P12838 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
DEFA4P12838 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
DEFA4P12838 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
DEFA4P12838 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
DEFA4P12838 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.78■□□□□ 0.28
DEFA4P12838 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
DEFA4P12838 RASA4CP-201ENST00000424092 1398 ntBASIC16.77■□□□□ 0.28
DEFA4P12838 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DEFA4P12838 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
DEFA4P12838 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC16.77■□□□□ 0.28
DEFA4P12838 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
DEFA4P12838 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
DEFA4P12838 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
DEFA4P12838 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DEFA4P12838 ASL-203ENST00000380839 1765 ntTSL 5 BASIC16.77■□□□□ 0.28
DEFA4P12838 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
DEFA4P12838 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
DEFA4P12838 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DEFA4P12838 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DEFA4P12838 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
DEFA4P12838 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
DEFA4P12838 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
DEFA4P12838 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DEFA4P12838 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.77■□□□□ 0.28
DEFA4P12838 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DEFA4P12838 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DEFA4P12838 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.77■□□□□ 0.28
DEFA4P12838 AC091305.1-201ENST00000479476 895 ntBASIC16.77■□□□□ 0.28
DEFA4P12838 AP001330.3-201ENST00000520123 633 ntBASIC16.77■□□□□ 0.28
DEFA4P12838 AC133561.4-201ENST00000566112 224 ntBASIC16.77■□□□□ 0.28
DEFA4P12838 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC16.77■□□□□ 0.28
DEFA4P12838 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
DEFA4P12838 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
DEFA4P12838 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
DEFA4P12838 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.77■□□□□ 0.27
DEFA4P12838 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
DEFA4P12838 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
DEFA4P12838 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
DEFA4P12838 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
DEFA4P12838 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.77■□□□□ 0.27
DEFA4P12838 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
DEFA4P12838 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
DEFA4P12838 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DEFA4P12838 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
DEFA4P12838 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
DEFA4P12838 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
DEFA4P12838 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
DEFA4P12838 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.76■□□□□ 0.27
DEFA4P12838 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
DEFA4P12838 AF213884.3-201ENST00000563833 479 ntBASIC16.76■□□□□ 0.27
DEFA4P12838 MAG-206ENST00000597035 542 ntTSL 4 BASIC16.76■□□□□ 0.27
DEFA4P12838 AL139246.5-201ENST00000606645 996 ntBASIC16.76■□□□□ 0.27
DEFA4P12838 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DEFA4P12838 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DEFA4P12838 FEM1AP1-201ENST00000431297 1995 ntBASIC16.76■□□□□ 0.27
DEFA4P12838 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DEFA4P12838 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DEFA4P12838 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC16.76■□□□□ 0.27
DEFA4P12838 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DEFA4P12838 AP006587.3-201ENST00000525742 1516 ntBASIC16.75■□□□□ 0.27
DEFA4P12838 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC16.75■□□□□ 0.27
DEFA4P12838 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
DEFA4P12838 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
DEFA4P12838 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.75■□□□□ 0.27
DEFA4P12838 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
DEFA4P12838 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
DEFA4P12838 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.75■□□□□ 0.27
DEFA4P12838 AC003102.1-202ENST00000563394 1796 ntBASIC16.75■□□□□ 0.27
DEFA4P12838 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
DEFA4P12838 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
DEFA4P12838 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC16.75■□□□□ 0.27
DEFA4P12838 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC16.75■□□□□ 0.27
DEFA4P12838 AC009237.3-201ENST00000393279 1427 ntBASIC16.75■□□□□ 0.27
DEFA4P12838 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
DEFA4P12838 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.75■□□□□ 0.27
DEFA4P12838 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.75■□□□□ 0.27
DEFA4P12838 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
DEFA4P12838 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
DEFA4P12838 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
DEFA4P12838 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
DEFA4P12838 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
DEFA4P12838 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
DEFA4P12838 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
DEFA4P12838 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
DEFA4P12838 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms