Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
LAMP1P11279 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.64■□□□□ 0.73
LAMP1P11279 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LAMP1P11279 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LAMP1P11279 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LAMP1P11279 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.63■□□□□ 0.73
LAMP1P11279 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LAMP1P11279 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LAMP1P11279 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
LAMP1P11279 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
LAMP1P11279 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LAMP1P11279 POU5F1P4-201ENST00000413175 1085 ntBASIC19.63■□□□□ 0.73
LAMP1P11279 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.63■□□□□ 0.73
LAMP1P11279 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.63■□□□□ 0.73
LAMP1P11279 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.63■□□□□ 0.73
LAMP1P11279 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LAMP1P11279 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
LAMP1P11279 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LAMP1P11279 AC008175.2-201ENST00000612840 297 ntBASIC19.63■□□□□ 0.73
LAMP1P11279 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
LAMP1P11279 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.63■□□□□ 0.73
LAMP1P11279 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LAMP1P11279 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.63■□□□□ 0.73
LAMP1P11279 AC027702.1-201ENST00000563810 1770 ntBASIC19.62■□□□□ 0.73
LAMP1P11279 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LAMP1P11279 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.62■□□□□ 0.73
LAMP1P11279 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LAMP1P11279 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.62■□□□□ 0.73
LAMP1P11279 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LAMP1P11279 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
LAMP1P11279 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LAMP1P11279 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LAMP1P11279 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LAMP1P11279 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.62■□□□□ 0.73
LAMP1P11279 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
LAMP1P11279 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LAMP1P11279 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.62■□□□□ 0.73
LAMP1P11279 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
LAMP1P11279 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
LAMP1P11279 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LAMP1P11279 AC011484.1-201ENST00000377652 1995 ntBASIC19.62■□□□□ 0.73
LAMP1P11279 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
LAMP1P11279 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LAMP1P11279 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LAMP1P11279 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.62■□□□□ 0.73
LAMP1P11279 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
LAMP1P11279 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
LAMP1P11279 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
LAMP1P11279 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
LAMP1P11279 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
LAMP1P11279 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LAMP1P11279 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LAMP1P11279 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LAMP1P11279 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LAMP1P11279 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
LAMP1P11279 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LAMP1P11279 AC138907.5-202ENST00000569484 235 ntBASIC19.61■□□□□ 0.73
LAMP1P11279 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.61■□□□□ 0.73
LAMP1P11279 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LAMP1P11279 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LAMP1P11279 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.61■□□□□ 0.73
LAMP1P11279 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LAMP1P11279 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LAMP1P11279 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.61■□□□□ 0.73
LAMP1P11279 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LAMP1P11279 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LAMP1P11279 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LAMP1P11279 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LAMP1P11279 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.6■□□□□ 0.73
LAMP1P11279 FP700111.2-201ENST00000619190 1892 ntBASIC19.6■□□□□ 0.73
LAMP1P11279 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
LAMP1P11279 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LAMP1P11279 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LAMP1P11279 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
LAMP1P11279 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
LAMP1P11279 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LAMP1P11279 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LAMP1P11279 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LAMP1P11279 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
LAMP1P11279 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.6■□□□□ 0.73
LAMP1P11279 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.6■□□□□ 0.73
LAMP1P11279 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.6■□□□□ 0.73
LAMP1P11279 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LAMP1P11279 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LAMP1P11279 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.6■□□□□ 0.73
LAMP1P11279 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.6■□□□□ 0.73
LAMP1P11279 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LAMP1P11279 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
LAMP1P11279 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.59■□□□□ 0.73
LAMP1P11279 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.59■□□□□ 0.73
LAMP1P11279 LINC02228-203ENST00000641970 1355 ntBASIC19.59■□□□□ 0.73
LAMP1P11279 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
LAMP1P11279 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LAMP1P11279 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LAMP1P11279 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.59■□□□□ 0.73
LAMP1P11279 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LAMP1P11279 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LAMP1P11279 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.59■□□□□ 0.73
LAMP1P11279 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
LAMP1P11279 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms