Protein–RNA interactions for Protein: P0DN86

CGB3, Choriogonadotropin subunit beta 3, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB3P0DN86 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CGB3P0DN86 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CGB3P0DN86 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.05■□□□□ 0.32
CGB3P0DN86 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CGB3P0DN86 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CGB3P0DN86 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
CGB3P0DN86 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CGB3P0DN86 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CGB3P0DN86 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CGB3P0DN86 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.04■□□□□ 0.32
CGB3P0DN86 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.04■□□□□ 0.32
CGB3P0DN86 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.04■□□□□ 0.32
CGB3P0DN86 UBE2DNL-204ENST00000602536 740 ntBASIC17.04■□□□□ 0.32
CGB3P0DN86 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
CGB3P0DN86 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.04■□□□□ 0.32
CGB3P0DN86 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CGB3P0DN86 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CGB3P0DN86 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CGB3P0DN86 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CGB3P0DN86 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CGB3P0DN86 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CGB3P0DN86 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CGB3P0DN86 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CGB3P0DN86 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CGB3P0DN86 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CGB3P0DN86 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CGB3P0DN86 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CGB3P0DN86 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CGB3P0DN86 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CGB3P0DN86 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.03■□□□□ 0.32
CGB3P0DN86 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CGB3P0DN86 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CGB3P0DN86 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.03■□□□□ 0.32
CGB3P0DN86 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.03■□□□□ 0.32
CGB3P0DN86 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CGB3P0DN86 MYCNOS-205ENST00000641950 531 ntBASIC17.03■□□□□ 0.32
CGB3P0DN86 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CGB3P0DN86 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CGB3P0DN86 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.03■□□□□ 0.32
CGB3P0DN86 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CGB3P0DN86 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.03■□□□□ 0.32
CGB3P0DN86 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CGB3P0DN86 AC007225.1-201ENST00000566331 1836 ntBASIC17.03■□□□□ 0.32
CGB3P0DN86 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CGB3P0DN86 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CGB3P0DN86 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CGB3P0DN86 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CGB3P0DN86 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CGB3P0DN86 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CGB3P0DN86 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CGB3P0DN86 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CGB3P0DN86 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.02■□□□□ 0.32
CGB3P0DN86 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CGB3P0DN86 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CGB3P0DN86 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.02■□□□□ 0.32
CGB3P0DN86 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CGB3P0DN86 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.02■□□□□ 0.32
CGB3P0DN86 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.02■□□□□ 0.32
CGB3P0DN86 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CGB3P0DN86 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.02■□□□□ 0.32
CGB3P0DN86 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CGB3P0DN86 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CGB3P0DN86 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CGB3P0DN86 FEM1AP1-201ENST00000431297 1995 ntBASIC17.02■□□□□ 0.31
CGB3P0DN86 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CGB3P0DN86 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
CGB3P0DN86 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CGB3P0DN86 AC116050.2-201ENST00000612102 1779 ntBASIC17.02■□□□□ 0.31
CGB3P0DN86 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
CGB3P0DN86 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CGB3P0DN86 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CGB3P0DN86 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CGB3P0DN86 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.01■□□□□ 0.31
CGB3P0DN86 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CGB3P0DN86 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.01■□□□□ 0.31
CGB3P0DN86 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.01■□□□□ 0.31
CGB3P0DN86 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
CGB3P0DN86 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.01■□□□□ 0.31
CGB3P0DN86 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.01■□□□□ 0.31
CGB3P0DN86 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
CGB3P0DN86 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CGB3P0DN86 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.01■□□□□ 0.31
CGB3P0DN86 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.01■□□□□ 0.31
CGB3P0DN86 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CGB3P0DN86 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.01■□□□□ 0.31
CGB3P0DN86 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CGB3P0DN86 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CGB3P0DN86 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CGB3P0DN86 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17■□□□□ 0.31
CGB3P0DN86 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17■□□□□ 0.31
CGB3P0DN86 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17■□□□□ 0.31
CGB3P0DN86 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CGB3P0DN86 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17■□□□□ 0.31
CGB3P0DN86 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17■□□□□ 0.31
CGB3P0DN86 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CGB3P0DN86 AC027702.1-201ENST00000563810 1770 ntBASIC17■□□□□ 0.31
CGB3P0DN86 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17■□□□□ 0.31
CGB3P0DN86 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CGB3P0DN86 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CGB3P0DN86 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms