Protein–RNA interactions for Protein: P07498

CSN3, Kappa-casein, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSN3P07498 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSN3P07498 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSN3P07498 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSN3P07498 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CSN3P07498 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSN3P07498 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSN3P07498 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC16.22■□□□□ 0.19
CSN3P07498 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSN3P07498 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSN3P07498 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSN3P07498 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC16.22■□□□□ 0.19
CSN3P07498 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CSN3P07498 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC16.22■□□□□ 0.19
CSN3P07498 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSN3P07498 FXN-202ENST00000396364 980 ntTSL 5 BASIC16.22■□□□□ 0.19
CSN3P07498 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CSN3P07498 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC16.22■□□□□ 0.19
CSN3P07498 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSN3P07498 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.22■□□□□ 0.19
CSN3P07498 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.22■□□□□ 0.19
CSN3P07498 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
CSN3P07498 AC022517.1-201ENST00000592429 346 ntBASIC16.22■□□□□ 0.19
CSN3P07498 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CSN3P07498 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC16.22■□□□□ 0.19
CSN3P07498 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CSN3P07498 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSN3P07498 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSN3P07498 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
CSN3P07498 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSN3P07498 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CSN3P07498 KRT87P-202ENST00000534226 1464 ntBASIC16.22■□□□□ 0.19
CSN3P07498 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
CSN3P07498 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSN3P07498 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.21■□□□□ 0.19
CSN3P07498 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CSN3P07498 MFF-207ENST00000409565 1548 ntTSL 2 BASIC16.21■□□□□ 0.19
CSN3P07498 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC16.21■□□□□ 0.19
CSN3P07498 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.21■□□□□ 0.19
CSN3P07498 FAM99A-202ENST00000538190 1989 ntBASIC16.21■□□□□ 0.19
CSN3P07498 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSN3P07498 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC16.21■□□□□ 0.19
CSN3P07498 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CSN3P07498 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC16.21■□□□□ 0.19
CSN3P07498 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.21■□□□□ 0.19
CSN3P07498 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC16.21■□□□□ 0.19
CSN3P07498 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC16.21■□□□□ 0.19
CSN3P07498 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSN3P07498 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.21■□□□□ 0.19
CSN3P07498 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSN3P07498 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CSN3P07498 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSN3P07498 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CSN3P07498 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CSN3P07498 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC16.21■□□□□ 0.19
CSN3P07498 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CSN3P07498 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSN3P07498 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.2■□□□□ 0.18
CSN3P07498 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSN3P07498 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSN3P07498 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSN3P07498 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CSN3P07498 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CSN3P07498 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.2■□□□□ 0.18
CSN3P07498 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSN3P07498 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSN3P07498 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSN3P07498 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSN3P07498 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSN3P07498 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC16.2■□□□□ 0.18
CSN3P07498 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
CSN3P07498 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC16.2■□□□□ 0.18
CSN3P07498 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSN3P07498 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC16.2■□□□□ 0.18
CSN3P07498 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC16.2■□□□□ 0.18
CSN3P07498 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSN3P07498 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSN3P07498 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CSN3P07498 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSN3P07498 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.2■□□□□ 0.18
CSN3P07498 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CSN3P07498 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CSN3P07498 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSN3P07498 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC16.19■□□□□ 0.18
CSN3P07498 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSN3P07498 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSN3P07498 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.19■□□□□ 0.18
CSN3P07498 KRT19P1-201ENST00000405746 1186 ntBASIC16.19■□□□□ 0.18
CSN3P07498 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.19■□□□□ 0.18
CSN3P07498 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC16.19■□□□□ 0.18
CSN3P07498 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC16.19■□□□□ 0.18
CSN3P07498 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CSN3P07498 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC16.19■□□□□ 0.18
CSN3P07498 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CSN3P07498 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC16.19■□□□□ 0.18
CSN3P07498 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC16.19■□□□□ 0.18
CSN3P07498 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC16.19■□□□□ 0.18
CSN3P07498 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CSN3P07498 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CSN3P07498 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSN3P07498 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms