Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TPM3P06753 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TPM3P06753 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
TPM3P06753 PCDHAC2-203ENST00000615316 3011 ntBASIC23.19■■□□□ 1.3
TPM3P06753 RARRES2P1-201ENST00000474487 481 ntBASIC23.19■■□□□ 1.3
TPM3P06753 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.19■■□□□ 1.3
TPM3P06753 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
TPM3P06753 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
TPM3P06753 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
TPM3P06753 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC23.19■■□□□ 1.3
TPM3P06753 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.19■■□□□ 1.3
TPM3P06753 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
TPM3P06753 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TPM3P06753 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TPM3P06753 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
TPM3P06753 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TPM3P06753 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TPM3P06753 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
TPM3P06753 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC23.18■■□□□ 1.3
TPM3P06753 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.18■■□□□ 1.3
TPM3P06753 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TPM3P06753 AC087289.5-201ENST00000586076 3175 ntBASIC23.18■■□□□ 1.3
TPM3P06753 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
TPM3P06753 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TPM3P06753 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TPM3P06753 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TPM3P06753 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC23.18■■□□□ 1.3
TPM3P06753 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC23.18■■□□□ 1.3
TPM3P06753 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
TPM3P06753 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
TPM3P06753 AC018445.3-201ENST00000624177 1945 ntBASIC23.18■■□□□ 1.3
TPM3P06753 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC23.17■■□□□ 1.3
TPM3P06753 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TPM3P06753 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TPM3P06753 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
TPM3P06753 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
TPM3P06753 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TPM3P06753 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC23.17■■□□□ 1.3
TPM3P06753 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC23.17■■□□□ 1.3
TPM3P06753 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TPM3P06753 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TPM3P06753 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TPM3P06753 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.17■■□□□ 1.3
TPM3P06753 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
TPM3P06753 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC23.17■■□□□ 1.3
TPM3P06753 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TPM3P06753 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
TPM3P06753 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
TPM3P06753 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
TPM3P06753 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TPM3P06753 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TPM3P06753 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
TPM3P06753 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC23.17■■□□□ 1.3
TPM3P06753 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC23.16■■□□□ 1.3
TPM3P06753 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TPM3P06753 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TPM3P06753 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TPM3P06753 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TPM3P06753 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TPM3P06753 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.16■■□□□ 1.3
TPM3P06753 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.16■■□□□ 1.3
TPM3P06753 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.16■■□□□ 1.3
TPM3P06753 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.16■■□□□ 1.3
TPM3P06753 AC010525.1-201ENST00000585559 441 ntBASIC23.16■■□□□ 1.3
TPM3P06753 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TPM3P06753 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TPM3P06753 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TPM3P06753 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC23.16■■□□□ 1.3
TPM3P06753 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC23.16■■□□□ 1.3
TPM3P06753 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TPM3P06753 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC23.16■■□□□ 1.3
TPM3P06753 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TPM3P06753 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TPM3P06753 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TPM3P06753 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TPM3P06753 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TPM3P06753 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC23.15■■□□□ 1.3
TPM3P06753 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TPM3P06753 AP006587.3-201ENST00000525742 1516 ntBASIC23.15■■□□□ 1.3
TPM3P06753 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TPM3P06753 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.15■■□□□ 1.3
TPM3P06753 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TPM3P06753 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TPM3P06753 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC23.15■■□□□ 1.3
TPM3P06753 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TPM3P06753 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TPM3P06753 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TPM3P06753 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TPM3P06753 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
TPM3P06753 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TPM3P06753 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC23.15■■□□□ 1.3
TPM3P06753 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TPM3P06753 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC23.14■■□□□ 1.3
TPM3P06753 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TPM3P06753 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
TPM3P06753 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
TPM3P06753 PALM-207ENST00000590161 2137 ntTSL 4 BASIC23.14■■□□□ 1.3
TPM3P06753 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TPM3P06753 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TPM3P06753 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms